RNA id: TU109167



Basic Information


Item Value
RNA id TU109167
length 237
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G73766
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1140349 ~ 1140659 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cacacacacactcacacactcacacactcacacacacacacactgctgttaCCTGTGCGTTGAAGGTGATGGCCTCCGCCTCTTCATCAGTCATGGCTGACAAGGTGTTCGTCGGCTCCTTCTCGCAGGGATCATGCAGGCCTGGCCCGCCTGGAGAGCAAgccaacatatttatattaaaaacgtGAAGTTCATTCAACAAATCGTATGAAGAAACTACTGTAAACTGGAGTGTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109160 lncRNA upstream 13883 1117113 ~ 1126466 (+) True G73760
TU109157 lncRNA upstream 18099 1117113 ~ 1122250 (+) False G73760
TU109164 lncRNA upstream 23960 1116133 ~ 1116389 (+) True G73763
TU109162 lncRNA upstream 58326 1081045 ~ 1082023 (+) False LOC122352734
TU109107 lncRNA upstream 220856 917796 ~ 919493 (+) True G73732
TU109326 lncRNA downstream 171485 1312144 ~ 1370207 (+) False G73880
TU109327 lncRNA downstream 171485 1312144 ~ 1364539 (+) True G73880
TU109338 lncRNA downstream 251489 1392148 ~ 1392465 (+) True G73888
TU109339 lncRNA downstream 253796 1394455 ~ 1394784 (+) True G73889
TU109357 lncRNA downstream 347584 1488243 ~ 1488680 (+) True G73904
XM_043250303.1 mRNA upstream 28175 1042039 ~ 1112174 (+) True LOC122352732
XM_043250509.1 mRNA downstream 110360 1251019 ~ 1296009 (+) True sh2d3ca
XM_043250511.1 mRNA downstream 110360 1251019 ~ 1296009 (+) False sh2d3ca
XM_043250512.1 mRNA downstream 123191 1263850 ~ 1296009 (+) False sh2d3ca
XM_043250513.1 mRNA downstream 123194 1263853 ~ 1296009 (+) False sh2d3ca
XM_043251185.1 mRNA downstream 159820 1300479 ~ 1310034 (+) True urm1
TU109131 other upstream 194496 934069 ~ 945853 (+) True rbm18
TU108992 other upstream 444426 693200 ~ 695923 (+) True isl1b
TU108810 other upstream 741493 398268 ~ 398856 (+) False c10h5orf63
TU109829 other downstream 970537 2111196 ~ 2111694 (+) True G74226
TU109752 other downstream 1053438 2194097 ~ 2200467 (+) True G74171
TU110053 other downstream 1448486 2589145 ~ 2705339 (+) False cntfr
TU110065 other downstream 1637200 2777859 ~ 2780475 (+) True il11ra
XR_006251933.1 other downstream 2428619 3569278 ~ 3572120 (+) False LOC122352855

Expression Profile