Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110601 |
| length | 704 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G74755 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056708.1 |
| NCBI id | CM032077.1 |
| chromosome length | 16503406 |
| location | 4130565 ~ 4131444 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0019221 | cytokine-mediated signaling pathway | biological_process |
| GO:0071345 | cellular response to cytokine stimulus | biological_process |
| GO:0034097 | response to cytokine | biological_process |
| GO:0017119 | Golgi transport complex | cellular_component |
| GO:0099023 | vesicle tethering complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110605 | lncRNA | downstream | 554 | 4126895 ~ 4130011 (-) | True | G74757 |
| TU110583 | lncRNA | downstream | 121191 | 4007230 ~ 4009374 (-) | True | G74737 |
| TU110588 | lncRNA | downstream | 130778 | 3997901 ~ 3999787 (-) | True | G74742 |
| TU110585 | lncRNA | downstream | 137131 | 3992187 ~ 3993434 (-) | True | G74739 |
| TU110415 | lncRNA | downstream | 298473 | 3831602 ~ 3832092 (-) | True | G74615 |
| TU110679 | lncRNA | upstream | 167292 | 4298736 ~ 4323950 (-) | True | G74791 |
| TU110687 | lncRNA | upstream | 231960 | 4363404 ~ 4364758 (-) | True | G74796 |
| TU110610 | lncRNA | upstream | 363616 | 4495060 ~ 4496658 (-) | True | G74762 |
| TU110694 | lncRNA | upstream | 379102 | 4510546 ~ 4510942 (-) | True | G74803 |
| TU110726 | lncRNA | upstream | 548259 | 4679703 ~ 4680232 (-) | True | G74819 |
| XM_043250417.1 | mRNA | downstream | 4033 | 4119378 ~ 4126532 (-) | True | dcp2 |
| XM_043250416.1 | mRNA | downstream | 14789 | 4106008 ~ 4115776 (-) | True | ca9 |
| XM_043250328.1 | mRNA | downstream | 217823 | 3905614 ~ 3912742 (-) | True | LOC122352741 |
| XM_043250920.1 | mRNA | downstream | 226442 | 3891642 ~ 3904123 (-) | True | pdzph1 |
| XM_043250198.1 | mRNA | downstream | 254011 | 3843692 ~ 3876554 (-) | False | pam |
| XM_043250373.1 | mRNA | upstream | 298 | 4131742 ~ 4153288 (-) | True | chd1 |
| XM_043250428.1 | mRNA | upstream | 23960 | 4155404 ~ 4164114 (-) | True | macir |
| XM_043250429.1 | mRNA | upstream | 23960 | 4155404 ~ 4164095 (-) | False | macir |
| XM_043250376.1 | mRNA | upstream | 35578 | 4167022 ~ 4201387 (-) | False | ppip5k2 |
| XM_043250383.1 | mRNA | upstream | 35578 | 4167022 ~ 4201386 (-) | False | ppip5k2 |
| XR_006251921.1 | other | downstream | 217823 | 3905614 ~ 3912742 (-) | False | LOC122352741 |
| XR_006251920.1 | other | downstream | 217823 | 3905614 ~ 3912742 (-) | False | LOC122352741 |
| XR_006251926.1 | other | downstream | 522777 | 3601612 ~ 3607788 (-) | False | hnrnpd |
| TU110254 | other | downstream | 790636 | 3337388 ~ 3339929 (-) | False | LOC122353137 |
| TU109952 | other | downstream | 1933254 | 2194115 ~ 2197311 (-) | False | LOC122352692 |
| TU111527 | other | upstream | 2407090 | 6538534 ~ 6540926 (-) | False | si:ch211-113d22.2 |
| TU111553 | other | upstream | 2496981 | 6628425 ~ 6631157 (-) | False | sprn2 |
| TU111552 | other | upstream | 2496986 | 6628430 ~ 6631157 (-) | False | sprn2 |
| TU111694 | other | upstream | 3045880 | 7177324 ~ 7180821 (-) | False | G75454 |
| TU111693 | other | upstream | 3046307 | 7177751 ~ 7180821 (-) | True | G75454 |
