RNA id: TU110797


Basic Information

Item Value
RNA id TU110797
length 396
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G74861
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 4903977 ~ 4904469 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttaaatataaaatgtgattttaactACTTGTcagtacatatttaaaagattatCATGAGCAGAACAACTTACAACGAATATTTAAGAGTATCGTCCAGTTCCATAATGGCTGCCTGATTTCCACAGCGATAGCAGTAGTTTGGGGCACTGAAGATAGTGACAACATTCCTATCATGACACCAGTTgtatccATGACCAGCTGATGCGCACGAGACACCAGCGTGAGTCCGTTAGCGTGGTTGAAGGTCTCAGAAATGTCCTGTCCAAACGTGTAACCGGCTCCACGTGGAGAGATTCCCCAACCACCACGATCATCAGGATCTGACCACAGCAGATCACACATGGGTCCCTGAAACACAGATGCACAGCTCATTCAAAACGACGCAGATTCTGCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110793 lncRNA downstream 6890 4891594 ~ 4897087 (-) False G74858
TU110794 lncRNA downstream 6890 4891594 ~ 4897087 (-) True G74858
TU110773 lncRNA downstream 63316 4839217 ~ 4840661 (-) True G74846
TU110726 lncRNA downstream 223745 4679703 ~ 4680232 (-) True G74819
TU110694 lncRNA downstream 393035 4510546 ~ 4510942 (-) True G74803
TU110807 lncRNA upstream 22736 4927205 ~ 4927617 (-) True G74869
TU110866 lncRNA upstream 57101 4961570 ~ 4962233 (-) True G74915
TU110872 lncRNA upstream 114857 5019326 ~ 5020819 (-) False LOC122352369
TU110897 lncRNA upstream 154045 5058514 ~ 5059679 (-) True G74935
TU110898 lncRNA upstream 156131 5060600 ~ 5061090 (-) True G74936
XM_043251098.1 mRNA downstream 36398 4823464 ~ 4867579 (-) False LOC122353167
XM_043250037.1 mRNA upstream 1412 4905881 ~ 4911182 (-) True ubxn8
XM_043249808.1 mRNA upstream 96215 5000684 ~ 5017151 (-) True LOC122352400
XM_043249781.1 mRNA upstream 114838 5019307 ~ 5028513 (-) True LOC122352369
XM_043250004.1 mRNA upstream 124836 5029305 ~ 5031460 (-) False LOC122352563
XM_043250003.1 mRNA upstream 124836 5029305 ~ 5031327 (-) False LOC122352563
XR_006251921.1 other downstream 991235 3905614 ~ 3912742 (-) False LOC122352741
XR_006251920.1 other downstream 991235 3905614 ~ 3912742 (-) False LOC122352741
XR_006251926.1 other downstream 1296189 3601612 ~ 3607788 (-) False hnrnpd
TU110254 other downstream 1564048 3337388 ~ 3339929 (-) False LOC122353137
TU109952 other downstream 2706666 2194115 ~ 2197311 (-) False LOC122352692
TU111527 other upstream 1634065 6538534 ~ 6540926 (-) False si:ch211-113d22.2
TU111553 other upstream 1723956 6628425 ~ 6631157 (-) False sprn2
TU111552 other upstream 1723961 6628430 ~ 6631157 (-) False sprn2
TU111694 other upstream 2272855 7177324 ~ 7180821 (-) False G75454
TU111693 other upstream 2273282 7177751 ~ 7180821 (-) True G75454

Expression Profile