Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110855 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G74906 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056708.1 |
| NCBI id | CM032077.1 |
| chromosome length | 16503406 |
| location | 5087280 ~ 5087591 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110849 | lncRNA | upstream | 13074 | 5073928 ~ 5074206 (+) | True | G74902 |
| TU110831 | lncRNA | upstream | 66479 | 5019196 ~ 5020801 (+) | True | G74889 |
| TU110834 | lncRNA | upstream | 66874 | 5019196 ~ 5020406 (+) | False | G74889 |
| TU110833 | lncRNA | upstream | 66874 | 5019341 ~ 5020406 (+) | False | G74889 |
| TU110824 | lncRNA | upstream | 84838 | 5000682 ~ 5002442 (+) | True | G74882 |
| TU110857 | lncRNA | downstream | 10053 | 5097644 ~ 5098564 (+) | True | G74908 |
| TU110863 | lncRNA | downstream | 20194 | 5107785 ~ 5108114 (+) | True | G74914 |
| TU110852 | lncRNA | downstream | 29275 | 5116866 ~ 5117649 (+) | False | LOC122352404 |
| TU110922 | lncRNA | downstream | 148008 | 5235599 ~ 5235955 (+) | True | G74958 |
| XR_006251886.1 | lncRNA | downstream | 150688 | 5238279 ~ 5239558 (+) | False | LOC122352567 |
| XM_043250823.1 | mRNA | upstream | 19743 | 5058497 ~ 5067537 (+) | False | LOC122352997 |
| XM_043250822.1 | mRNA | upstream | 19743 | 5059768 ~ 5067537 (+) | True | LOC122352997 |
| XM_043250595.1 | mRNA | upstream | 38131 | 5046251 ~ 5049149 (+) | True | si:dkey-210j14.3 |
| XM_043250592.1 | mRNA | upstream | 41742 | 5038850 ~ 5045538 (+) | True | LOC122352867 |
| XM_043250593.1 | mRNA | upstream | 42160 | 5038846 ~ 5045120 (+) | False | LOC122352867 |
| XM_043249821.1 | mRNA | downstream | 30258 | 5117849 ~ 5123373 (+) | True | LOC122352404 |
| XM_043251132.1 | mRNA | downstream | 245419 | 5333010 ~ 5357455 (+) | True | sppl3 |
| XM_043250805.1 | mRNA | downstream | 324092 | 5411683 ~ 5446436 (+) | True | kcnn2 |
| XM_043250803.1 | mRNA | downstream | 324093 | 5411684 ~ 5446436 (+) | False | kcnn2 |
| XM_043250804.1 | mRNA | downstream | 324093 | 5411684 ~ 5444613 (+) | False | kcnn2 |
| TU110461 | other | upstream | 587180 | 4496574 ~ 4500100 (+) | False | LOC122352783 |
| TU110470 | other | upstream | 966833 | 4075338 ~ 4120447 (+) | False | LOC122352388 |
| TU110458 | other | upstream | 1040326 | 4043587 ~ 4046954 (+) | False | LOC122352388 |
| TU110456 | other | upstream | 1044586 | 4013060 ~ 4042694 (+) | False | LOC122352388 |
| TU110241 | other | upstream | 1392684 | 3669023 ~ 3694596 (+) | True | cdc42se2 |
| TU110851 | other | downstream | 30260 | 5117851 ~ 5120654 (+) | False | LOC122352404 |
| TU110913 | other | downstream | 33898 | 5121489 ~ 5123272 (+) | False | LOC122352404 |
| TU110926 | other | downstream | 150837 | 5238428 ~ 5250137 (+) | False | LOC122352567 |
| TU110925 | other | downstream | 156999 | 5244590 ~ 5250137 (+) | True | LOC122352567 |
| TU110943 | other | downstream | 169247 | 5256838 ~ 5258823 (+) | True | G74965 |
