Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU112188 |
| length | 472 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G75799 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056708.1 |
| NCBI id | CM032077.1 |
| chromosome length | 16503406 |
| location | 8313561 ~ 8314122 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| GO:0017171 | serine hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU112158 | lncRNA | upstream | 27696 | 8285155 ~ 8285865 (+) | True | G75774 |
| TU112150 | lncRNA | upstream | 147857 | 8165448 ~ 8165704 (+) | True | G75766 |
| TU111975 | lncRNA | upstream | 243650 | 8036134 ~ 8069911 (+) | True | G75629 |
| TU111946 | lncRNA | upstream | 410830 | 7901223 ~ 7902731 (+) | True | G75607 |
| TU111922 | lncRNA | upstream | 453849 | 7840598 ~ 7859712 (+) | True | G75591 |
| TU112211 | lncRNA | downstream | 83710 | 8397832 ~ 8462407 (+) | True | G75814 |
| TU112210 | lncRNA | downstream | 150622 | 8464744 ~ 8467277 (+) | True | G75813 |
| XR_006251938.1 | lncRNA | downstream | 389392 | 8703514 ~ 8704860 (+) | True | LOC122352915 |
| TU112404 | lncRNA | downstream | 394632 | 8708754 ~ 8712198 (+) | True | G75934 |
| TU112452 | lncRNA | downstream | 931876 | 9245998 ~ 9253481 (+) | True | G75974 |
| XM_043250653.1 | mRNA | upstream | 18726 | 8292462 ~ 8294835 (+) | True | fam166b |
| XM_043250655.1 | mRNA | upstream | 29251 | 8272091 ~ 8284310 (+) | True | rnf208 |
| XM_043250629.1 | mRNA | upstream | 43320 | 8259988 ~ 8270241 (+) | True | LOC122352886 |
| XM_043250630.1 | mRNA | upstream | 72105 | 8228308 ~ 8241456 (+) | True | LOC122352887 |
| XM_043250661.1 | mRNA | upstream | 127911 | 8159643 ~ 8185650 (+) | True | LOC122352913 |
| XM_043250650.1 | mRNA | downstream | 84064 | 8398186 ~ 8401596 (+) | True | stoml2 |
| XM_043250659.1 | mRNA | downstream | 95745 | 8409867 ~ 8411603 (+) | True | fam136a |
| XM_043250626.1 | mRNA | downstream | 106214 | 8420336 ~ 8426930 (+) | True | ggcx |
| XM_043250651.1 | mRNA | downstream | 161471 | 8475593 ~ 8481988 (+) | True | sftpba |
| XM_043250660.1 | mRNA | downstream | 265887 | 8580009 ~ 8581128 (+) | True | LOC122352912 |
| TU112127 | other | upstream | 210637 | 8101476 ~ 8102924 (+) | True | G75750 |
| XR_006251892.1 | other | upstream | 434320 | 7872539 ~ 7879241 (+) | False | arrb2a |
| XR_006252002.1 | other | upstream | 449649 | 7863779 ~ 7863912 (+) | True | LOC122353466 |
| unassigned_transcript_1471 | other | upstream | 451528 | 7861960 ~ 7862033 (+) | True | trnat-agu_2 |
| unassigned_transcript_1470 | other | upstream | 451887 | 7861593 ~ 7861674 (+) | True | trnas-gcu_13 |
| TU112216 | other | downstream | 266177 | 8580299 ~ 8581102 (+) | False | LOC122352912 |
| TU112405 | other | downstream | 399081 | 8713203 ~ 8716277 (+) | True | G75935 |
| TU112407 | other | downstream | 419657 | 8733779 ~ 8734996 (+) | True | G75937 |
| TU112450 | other | downstream | 835669 | 9149791 ~ 9152619 (+) | False | gbe1a |
| TU112684 | other | downstream | 1378084 | 9692206 ~ 9699748 (+) | False | map3k7cl |
