RNA id: TU112450



Basic Information


Item Value
RNA id TU112450
length 351
RNA type TUCP
GC content 0.54
exon number 2
gene id gbe1a
representative False

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9076866 ~ 9207335 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGATACAACTGTGTCCAGCTCATGGCAGTTATGGAACATGCCTACTATGCAAGCTTTGGCTATCAGGTCACTAACTTCTTCGCAGCTTCcagCCGCTTCGGCACTCCTGATGATCTGAAGCATCTGGTTGACACCGCGCACTCGATGGGCCTCACGGTTCTTCTGGACGTGGTCCACAGTCACGCCTCCAGCAACACAGAAGATGGACTCAACTACTTCGACGGAACGGACTCCTGCTTCTTTCACGCAGGCTCCAGAGGAAACCACTCGCTCTGGGGCGGTCGGCTCTTCGATTACTCCAGGTGAACCGCTGCTAAGAAATATGCAAGCTGCTCACATTCCCAATTCTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU112404 lncRNA upstream 437593 8708754 ~ 8712198 (+) True G75934
XR_006251938.1 lncRNA upstream 444931 8703514 ~ 8704860 (+) True LOC122352915
TU112210 lncRNA upstream 682514 8464744 ~ 8467277 (+) True G75813
TU112211 lncRNA upstream 687384 8397832 ~ 8462407 (+) True G75814
TU112188 lncRNA upstream 835669 8313561 ~ 8314122 (+) True G75799
TU112452 lncRNA downstream 93379 9245998 ~ 9253481 (+) True G75974
TU112466 lncRNA downstream 114196 9266815 ~ 9273289 (+) True G75984
TU112468 lncRNA downstream 124814 9277433 ~ 9283648 (+) True LOC122353086
XR_006251959.1 lncRNA downstream 124945 9277564 ~ 9280809 (+) False LOC122353086
TU112489 lncRNA downstream 196553 9349172 ~ 9396047 (+) False LOC122353220
XM_043249831.1 mRNA upstream 64132 9070840 ~ 9085659 (+) True LOC122352417
XM_043250660.1 mRNA upstream 568663 8580009 ~ 8581128 (+) True LOC122352912
XM_043250651.1 mRNA upstream 667803 8475593 ~ 8481988 (+) True sftpba
XM_043250626.1 mRNA upstream 722861 8420336 ~ 8426930 (+) True ggcx
XM_043250659.1 mRNA upstream 738188 8409867 ~ 8411603 (+) True fam136a
XM_043250916.1 mRNA downstream 138232 9290851 ~ 9302634 (+) True paxbp1
XM_043250342.1 mRNA downstream 151017 9303636 ~ 9323880 (+) True slc7a1a
XM_043250343.1 mRNA downstream 151019 9303638 ~ 9323880 (+) False slc7a1a
XM_043251085.1 mRNA downstream 173205 9325824 ~ 9389728 (+) False mtus2a
XM_043251084.1 mRNA downstream 174176 9326795 ~ 9389728 (+) True mtus2a
TU112407 other upstream 414795 8733779 ~ 8734996 (+) True G75937
TU112405 other upstream 433514 8713203 ~ 8716277 (+) True G75935
TU112216 other upstream 568689 8580299 ~ 8581102 (+) False LOC122352912
TU112127 other upstream 1046867 8101476 ~ 8102924 (+) True G75750
XR_006251892.1 other upstream 1270550 7872539 ~ 7879241 (+) False arrb2a
TU112684 other downstream 539587 9692206 ~ 9699748 (+) False map3k7cl
TU113296 other downstream 1986293 11138912 ~ 11146033 (+) False LOC122352518
TU113543 other downstream 2570143 11722762 ~ 11724767 (+) False hyou1
TU113542 other downstream 2572629 11725248 ~ 11726005 (+) False hyou1
TU113655 other downstream 3131760 12284379 ~ 12285541 (+) False tmem218

Expression Profile