RNA id: TU112466


Basic Information

Item Value
RNA id TU112466
length 4971
lncRNA type inter_gene
GC content 0.39
exon number 3
gene id G75984
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9266815 ~ 9273289 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ataattaaacattttattgaatatagCCCTCAACAGTAATGCCATATAGAACAATACATGAAGGTTACATACATGAACAGCCACTGAAACACTGAGGTGTAAGTTAATATAAAAACCTTTGCAAATAAGGCTGCGTTGTCCATATGGTCCGTtagatttgaaagaaataaatacgtTACACACAACACCAAAACATTTCCACAGTATCCGTGGCTCCAGTCCTCCCGTCAGCTATCATCAGCATCGCTACCTTCACTGTAAACCGCACGAAAGGCACATTTGCGAGTTAAGTTGTGCTTATTTACTTACAATATTTTACTTCAGAGGTCCATTATAACTCGATCTTACGATCAGTGACTCAAATGACTCTTAACTCACTCTGAAACATCACAGAATGTTAgtaaaagagagacagaaaaagggAATTATGGGTCATGTGTTAAAAGTGCTGTTGTTGCCCTGACATCTGCGCCTCAGCTTTCAGCCATCGCCTCGCAGATCATAAGCATTTCAGCCGCTTTTATGTGTGCATCTCATGCGCATGTAGTGTAGAAACATATATACAAACTGAAATGCTCAAACTGTGGCTTTCACGAAGGTCCTGTGATCGAAAGAGATCACAGaggtttttataaatacaacatTACTTCATAGAAAAATGTCCAAAGCCCTTTGTGGAtcattagaaatgaaaaaagtggtCTTTTGTGAATACAACTGCATTGCGCCACAACTATTACAGCGAAAGCGGGGGCTATAATGGTTTATCCCTTGTGAAGTTGTGTTGAATGAATCGGGGTGTTTTGGGTGTTCCTGGGCAAGACAGCCAACTGGCATCATTACAATGTCTGTGCAGGCCAGGCTGGCTCAAAACATCCAGCTGGCATAAATGgtgtatttctataaaaaaaaaaaaattctctgtaCCGAAATGCCCCAGGTTTTATAGGAAGCAGTCAGGGTGGAAACTTTATCACATGTGCAAATGcgtaatataaaatatctgtataaatgaaaataaagcggCAAAGAAGAGGGttgctttctgtctctcttaTTCCTCTTTCCGTCCATTGAGTTATCCTCGAAGAAAGAGGCACGGTAGTTTTTAATCGTCTGTTTTTGTGTTGCTGTGATGCTTCTCTCATGCCTCCGTTTTTCCCTTTATCTGTTTTCTTTACACAAATGCCTCTGGTACGTCAGTGCCGTTGATTTTGAGATAGATTTTagcattgttttctttctccttccTCTTTTTGTGCAGGGTTTTCCTGAAGTACAGCAGGTAGAGCGGCAACAGGAAGCCCAGCATGCTGACAGCCAGCAGACCCACGTTCACCTACaccaggaaaaaaacaaaaaaaaacataaagaggAGGTTTAAAACATGCCTGGCGGGCATTTAATCCATTTGGTATTACTAAAGCTCTCTGTTGTGCGTTTCATACCCAGAGTGGGTCTCCCTTCAGCGGTCCCATCATGGCCATGAACAAAGGCTGCTGCAGCAGAGCGAACACAGCGCTGACCAATGACTGCATTCCTGTCAGACTCCCGAACTGAGAGGACGGGTACCTGCCGACGCACAAACAGATTATTTGTTATCGTGTTATATGATTTACATGCAGCTATTACTGGAAAAAGTGATTATCAGAAGCAGGATTTAATCGTGTTTTACAGATAATATTGATAAACTCACACAGCGGCGTAAAGTCCACCGATGGCAGAGTGGATGAAGCCTCTGACGATTGTGTGAAGGACGAATGAGAGCATCTGGAGAAAGAAGACATAAGGTTcaattacaaacattaaaaacttgttcattctgctgtttttaatgGAGAATTAGCATTAGACCACTAGGGGGAGGTGCAATACAACTAAGCAGATGCTCAAGGCACCAATAGCAAGTGATTGTTGCTTCTTTTTTCTGTGTACATACCACTCTTACTATTTCTGCTGCATGGTATGCTTGCATACTACTAGTAGTATACTATTCTAAATTTAGCAATAGCCTTCTTCTGCACAAGGTGCAAATACATGCACAGAATATCCTTGAATATTGGGTCTATAGCATGTATTcgtgttttaaatgaacttttattttctgtattttaagtttgttttaattttagctttaagaatttttgtttattttattaagtattattattatgtttcagttttagttactTTAGTCTTTAAATTTAAGCTGATTTCACTTAACATTTTAGCTTATTTCAGGCAGCATTGctaaattttgtttttcacaacTGTGttatttgttacagtatttattaatgttttaaatgtattttaagtttatttatttatttaactttacaatgaaagtttattttaattgtagttttagtgtttattgttttgtatttattttattaattattattattgattctAGTTTTAGCTGTTTCAGTACTAATTTAGTTGCCACACTACATACAggctacaatttttttttccccatccaAAATGTTTACTTAATTTCAATTAtcgaaaaataattttaatagatttattaatacattttgttatattcatttaatagttttagtcatatttaaaaaataacaacacttGTAAACAACAtagcatacttaaaaaaaataaatatactgcaACAGCATACAAAAAAACCACTGCATTATTAAATGCGTTGACCAGTATTATTCATCCTAGTGCAGGATTAATTCCATACATAACACACACCTGAAGAGGGAGGTTGGGAATTAGGCAGGTGATGCCAAAGCCAACAAGAAGAATGTTGGTGAAGATGAAGGCCCGTGTGGCGTTGGTGACTTTCTGAATTTGTCTGTCTCTGCGTTTGGGCTGAGGCTCGTCCCTGGGGACAAGGagcaaatacaaacacattaaaaaaaaaaccattatttAGGTCACTTTCGCCTCCGTAGCTCACTTAAAAGTGTTTCATAACCTACTTGTTGGGCTCTTTTTCATCGTTTTCTCCATCATCGCATTCTTTTAGCTTCCAGTCCATAATCTGACCAATGACCGGCGTCGTCATCAAGCACAAGAGTTGCATCACGCCAAAAATAGAGGTGTAGAGGctcactgagagagagagagagagagagagagagagagaaagagagagagagcgagagagagatttaAACACTGCCTAATAGAGAACGTCTGAGGTTAGTTAATAACTACTCTGGTTAATGGCTAAGTTTATGGCGCTCTGCACACTTGCGTATGCATTACGGCCCAAAGCACAGGTGGGTAGGGAATGGGTTACGCTTGATGTGAGTACAGGACGTACAGGTTAAATGCTAGAATAACAAGCTTTAGGAAAGACACGCTCTACTGGTTTCTACTGTATTGTGCTACTGAGATTCTTACCCAATTCCATTCTCTCAACtgcaaaaatggtaaaaaaagaaagcaatttaGAAGACAATTGTAATGTAAATactgacttcttttttttttgctgtatataCATATCTGAATTATCgtgattaaaatgtgtgtgtgtgtgtgtgtttaaacacGTTTATTCACCAGTGTTGAGATCTCCTCCACTGAGGGACTCCAAGATGTTGTTCATGGCTCCCATGTAGAAGATGAGACGCAGTTGAGTTACACACATGGTCACCAGACTCAACATGAAGAGAGGGCTGAGAATGCTCTTCATGAACGATTGAGCTACAAGAAAAACAGAGTCAGTCTTAATTAGTTATTGACCTATCGTATTACCATAGTTTCTGACCTTCTTTGTGCAAGACCATCACTTACTTTCCTCCTTGGCCTCACACTGCAGTTCCAAGTCCATGGTGGACAGGCAGAGTTTTTGGCCCTCTTTTGCaagctctttctgtttctgagtGTTATCCACACTAAGACGCTTGCCCACTGTCGTCACCTGCTTATAAAACTGCTTTCCTGTAATCTTATGGTCAAATCCCAGCCAACTGAACTTGATCTTGACACTGAATAGGCAGAGAGGCAAAACATATTATAACAGAGTATCAGATATTGATGTTTAATACATATGAGTGTTGAGTATGTGTGTTTCTTACGTGTAGTCCATGTCCTCGGGTCCAGGGAAAGGTTCCAAGGGCCAGTTGAAGAAGCAGTTGATAAAGACGAGACCTGCACAGCCCGCCCAGACCACCAGAATCGTGATGAAGGTCACGCCAAGGTCATAAATCACCTGTAAAGATAAACAGCTAGTGTCTAAGAacaaaatgtagcattataaTCTTGTTTTTCACCAAATTGTTTCATCTTACAAACCTTGACCCCAGGAAAGGTGACAGCTGAGGAAGCGTACGAGCCAATCATGAGCGCGATGAAGATCAAAACGGACAGATCTAGAAAAACAGGCAGGTGTTAAAGGATGGAATATTATTGGTATCTGTTACAACGCTGGTGTCTCTTTAACTGAAATTGAACTCATTTGCATATATGATGTTCTTACCATTTGGATTGTTGGCTCCATAAGCAATCATAAGGCACGAGAGGGCAAAGCAGGCACTGGAAAAGAAAAGTGCCtgctttaataatgaaaaattcaaCACTTTTCTGGTCATTCGCGTGTATTGTGATCTGACCTTACAATCAACAATTTATCCATCTTGTGACTGGTATAGTAATGACATTGAAAAGCATGTTATTTACCTTCCAAGCAGCCGGAGTTTACGTGGGCCATATTTATCCATAACGATTCCAAGAGGGAGTGTGATGGCGCTGAGGAGAAAGGAGCCCACGGTGAAGGCCAGATTCAACATCTCATCCTGTTCTTTACAGATGAGCCAGCCGTTCATCCTCAGATTGTCCTCCGGATGGTTTAAAGGGACCACCTCCACGCTGCCATCACGCTTGACAGGCTGAAACTCATCGTATTCATAATCGGCATCATTTGACAGTGATGAAGGCACAGCTGGTAAGGAGAAGTTGGCCATCGAGCTGTTTCCTTTGGGAAAG

Function

GO:

id name namespace
GO:0047372 acylglycerol lipase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112452 lncRNA upstream 13334 9245998 ~ 9253481 (+) True G75974
TU112404 lncRNA upstream 554617 8708754 ~ 8712198 (+) True G75934
XR_006251938.1 lncRNA upstream 561955 8703514 ~ 8704860 (+) True LOC122352915
TU112210 lncRNA upstream 799538 8464744 ~ 8467277 (+) True G75813
TU112211 lncRNA upstream 804408 8397832 ~ 8462407 (+) True G75814
TU112468 lncRNA downstream 4144 9277433 ~ 9283648 (+) True LOC122353086
XR_006251959.1 lncRNA downstream 4275 9277564 ~ 9280809 (+) False LOC122353086
TU112489 lncRNA downstream 75883 9349172 ~ 9396047 (+) False LOC122353220
TU112687 lncRNA downstream 439538 9712827 ~ 9713108 (+) True G76150
TU112705 lncRNA downstream 489717 9763006 ~ 9766783 (+) True G76162
XM_043249832.1 mRNA upstream 59480 9076866 ~ 9207335 (+) True gbe1a
XM_043249831.1 mRNA upstream 181156 9070840 ~ 9085659 (+) True LOC122352417
XM_043250660.1 mRNA upstream 685687 8580009 ~ 8581128 (+) True LOC122352912
XM_043250651.1 mRNA upstream 784827 8475593 ~ 8481988 (+) True sftpba
XM_043250626.1 mRNA upstream 839885 8420336 ~ 8426930 (+) True ggcx
XM_043250916.1 mRNA downstream 17562 9290851 ~ 9302634 (+) True paxbp1
XM_043250342.1 mRNA downstream 30347 9303636 ~ 9323880 (+) True slc7a1a
XM_043250343.1 mRNA downstream 30349 9303638 ~ 9323880 (+) False slc7a1a
XM_043251085.1 mRNA downstream 52535 9325824 ~ 9389728 (+) False mtus2a
XM_043251084.1 mRNA downstream 53506 9326795 ~ 9389728 (+) True mtus2a
TU112450 other upstream 114196 9149791 ~ 9152619 (+) False gbe1a
TU112407 other upstream 531819 8733779 ~ 8734996 (+) True G75937
TU112405 other upstream 550538 8713203 ~ 8716277 (+) True G75935
TU112216 other upstream 685713 8580299 ~ 8581102 (+) False LOC122352912
TU112127 other upstream 1163891 8101476 ~ 8102924 (+) True G75750
TU112684 other downstream 418917 9692206 ~ 9699748 (+) False map3k7cl
TU113296 other downstream 1865623 11138912 ~ 11146033 (+) False LOC122352518
TU113543 other downstream 2449473 11722762 ~ 11724767 (+) False hyou1
TU113542 other downstream 2451959 11725248 ~ 11726005 (+) False hyou1
TU113655 other downstream 3011090 12284379 ~ 12285541 (+) False tmem218

Expression Profile