RNA id: TU112932


Basic Information

Item Value
RNA id TU112932
length 539
lncRNA type intronic
GC content 0.42
exon number 2
gene id G76327
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10098265 ~ 10106179 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTtggttcataaataaatgccttgtgTTGTTGGATTAAggcccccctctctctctgatcTTACCTTTTTATACGTTATTTCCGAAGACAATAcccttgaaaacaaacaagatggTTCACggatagaaaaaatataatttaatgaaatagaaaagtaaaacaaggtaattcaattatgaaaaatacttCCTAAATCCTAATTTTCTCAAAACCACgtatctccctccctctttaGGTTATAGGAAAACAGACaatgtactgaataaataaatcaaatcaacgtAACAAACAGCGACAACAGTGGGcccacaaaatcacacacacacacacacctccccgTTGCAGGCCTGTGTCGTGGCTAGTGTGCGTTGAGGCCTTGAAACTGAAACTGGCCGCTTCACTCGAATGagcaaacgaacaaacaaatacaaagtaCCCTTTCTTCCCGTTCCCGGATCGCGATCTCAATATTCCACCGAAGCGTCGATTGTCCCACGATGCCGGAGGAACACCCAACGTTTCCGGTAGCTGGGTGCGCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112929 lncRNA downstream 74564 10023495 ~ 10023701 (-) True G76324
TU112807 lncRNA downstream 274096 9823035 ~ 9824169 (-) True G76233
XR_006251940.1 lncRNA downstream 334774 9761809 ~ 9763491 (-) True LOC122352923
TU112803 lncRNA downstream 380852 9717033 ~ 9717413 (-) True G76229
TU112794 lncRNA downstream 387557 9702688 ~ 9710708 (-) True G76225
TU113040 lncRNA upstream 77915 10184094 ~ 10184522 (-) True G76388
TU113066 lncRNA upstream 135780 10241959 ~ 10242182 (-) True G76413
TU113074 lncRNA upstream 146846 10253025 ~ 10253861 (-) True G76421
TU113081 lncRNA upstream 210892 10317071 ~ 10317400 (-) True G76426
TU113138 lncRNA upstream 297778 10403957 ~ 10411838 (-) True G76458
XM_043249930.1 mRNA downstream 49808 10036639 ~ 10048457 (-) True arfip2b
XM_043249927.1 mRNA downstream 49810 10036639 ~ 10048455 (-) False arfip2b
XM_043249929.1 mRNA downstream 49811 10036639 ~ 10048454 (-) False arfip2b
XM_043249928.1 mRNA downstream 49811 10036639 ~ 10048454 (-) False arfip2b
XM_043249982.1 mRNA downstream 62072 10028731 ~ 10036193 (-) True fhdc3
XM_043250851.1 mRNA upstream 78615 10184794 ~ 10191230 (-) True LOC122353016
XM_043250135.1 mRNA upstream 161348 10267527 ~ 10283665 (-) False fgf13b
XM_043250131.1 mRNA upstream 183353 10289532 ~ 10303026 (-) False LOC122352632
XM_043250132.1 mRNA upstream 183353 10289532 ~ 10303024 (-) False LOC122352632
XM_043250130.1 mRNA upstream 183353 10289532 ~ 10303023 (-) True LOC122352632
XR_006251964.1 other downstream 472860 9589980 ~ 9625405 (-) False LOC122353179
TU112582 other downstream 668465 9427962 ~ 9429800 (-) True G76068
TU112377 other downstream 1542177 8545367 ~ 8556088 (-) False G75913
TU112375 other downstream 1552113 8543097 ~ 8546152 (-) False G75913
XR_006251935.1 other downstream 1570819 8520681 ~ 8527446 (-) False smtna
TU113078 other upstream 161175 10267354 ~ 10277701 (-) True fgf13b
TU113101 other upstream 273917 10380096 ~ 10383309 (-) True G76438
TU113102 other upstream 273917 10380096 ~ 10381047 (-) False G76438
TU113103 other upstream 273917 10380096 ~ 10383309 (-) False G76438
TU113196 other upstream 371880 10478059 ~ 10480189 (-) True G76498

Expression Profile