RNA id: TU113081



Basic Information


Item Value
RNA id TU113081
length 330
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G76426
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10317071 ~ 10317400 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTTCTTGACAATacgtaactttgcacctacatgtcagctaactttcattagagtataagtagactgtctgattattttctgctaactctttattgtgatgatctcccaacagacaCTTAACTGACTACaggtaacttttcaagaacatgtcagtttattctaaccctaaccttaccagtctactaatactctactaacactctaatgaaaagtgcaaagttacttattgtcaacagaatgttcctAAAGGACATGTTCATGTTGTTTCACAcctacagacaaaaaaaacagaattacagtattaattacatttactcaGATACACAAG

Function


GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113074 lncRNA downstream 63210 10253025 ~ 10253861 (-) True G76421
TU113066 lncRNA downstream 74889 10241959 ~ 10242182 (-) True G76413
TU113040 lncRNA downstream 132549 10184094 ~ 10184522 (-) True G76388
TU112932 lncRNA downstream 210892 10098265 ~ 10106179 (-) True G76327
TU112929 lncRNA downstream 293370 10023495 ~ 10023701 (-) True G76324
TU113138 lncRNA upstream 86557 10403957 ~ 10411838 (-) True G76458
TU113174 lncRNA upstream 107215 10424615 ~ 10445156 (-) True G76488
TU113180 lncRNA upstream 118792 10436192 ~ 10460399 (-) True G76489
TU113191 lncRNA upstream 138191 10455591 ~ 10456512 (-) True G76493
TU113376 lncRNA upstream 554406 10871806 ~ 10872087 (-) True G76618
XM_043250131.1 mRNA downstream 14045 10289532 ~ 10303026 (-) False LOC122352632
XM_043250132.1 mRNA downstream 14047 10289532 ~ 10303024 (-) False LOC122352632
XM_043250130.1 mRNA downstream 14048 10289532 ~ 10303023 (-) True LOC122352632
XM_043250135.1 mRNA downstream 33406 10267527 ~ 10283665 (-) False fgf13b
XM_043250851.1 mRNA downstream 125841 10184794 ~ 10191230 (-) True LOC122353016
XM_043250191.1 mRNA upstream 58102 10375502 ~ 10377728 (-) True znhit2
XM_043250195.1 mRNA upstream 60464 10377864 ~ 10379018 (-) True mrpl49
XM_043250197.1 mRNA upstream 63016 10380416 ~ 10381074 (-) True LOC122352676
XM_043250724.1 mRNA upstream 65276 10382676 ~ 10383332 (-) True LOC122352947
XM_043250725.1 mRNA upstream 66132 10383532 ~ 10384648 (-) True LOC122352948
TU113078 other downstream 39370 10267354 ~ 10277701 (-) True fgf13b
XR_006251964.1 other downstream 691666 9589980 ~ 9625405 (-) False LOC122353179
TU112582 other downstream 887271 9427962 ~ 9429800 (-) True G76068
TU112377 other downstream 1760983 8545367 ~ 8556088 (-) False G75913
TU112375 other downstream 1770919 8543097 ~ 8546152 (-) False G75913
TU113101 other upstream 62696 10380096 ~ 10383309 (-) True G76438
TU113102 other upstream 62696 10380096 ~ 10381047 (-) False G76438
TU113103 other upstream 62696 10380096 ~ 10383309 (-) False G76438
TU113196 other upstream 160659 10478059 ~ 10480189 (-) True G76498
XR_006251870.1 other upstream 658928 10976328 ~ 10983737 (-) False rps6kb1a

Expression Profile