RNA id: TU113196



Basic Information


Item Value
RNA id TU113196
length 387
RNA type TUCP
GC content 0.51
exon number 2
gene id G76498
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10478059 ~ 10480189 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AATGGGCCGGTCGGCCTGGTTTCTGAAAGCCACAGGCATGCAAACAACGAATGCTGCCAAACAGGAAAAACCCACGAGTCCAAAAGGCAGAGAAGATTTCAATCGAGCGACAGCAAGGCAGACAACGAGAGCAGGATCTATCGTGACAGACCCAGGCCCGATCAGACCGCTGTTATCTcccatcacacacactctgagccCCGGAGGCCCACTTACGCAGGGCATGATGTGTGGGCCCGGGGGGGGGGGAGACTTCATCTCTGACACAGAGAGACTCTCTAATTGCCTAACTGGATTCAGCCTCCAGTGTGAAATATCTCCAGAGGAGAAATGGAGAACGATAGAGACGtaaagagagacggagagacaaaaaaaaaaaaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113180 lncRNA downstream 17660 10436192 ~ 10460399 (-) True G76489
TU113191 lncRNA downstream 21547 10455591 ~ 10456512 (-) True G76493
TU113174 lncRNA downstream 32903 10424615 ~ 10445156 (-) True G76488
TU113138 lncRNA downstream 66221 10403957 ~ 10411838 (-) True G76458
TU113081 lncRNA downstream 160659 10317071 ~ 10317400 (-) True G76426
TU113376 lncRNA upstream 391617 10871806 ~ 10872087 (-) True G76618
XR_006251956.1 lncRNA upstream 466843 10947032 ~ 10950467 (-) True LOC122353057
TU113386 lncRNA upstream 479747 10959936 ~ 10987235 (-) False G76622
TU113385 lncRNA upstream 480971 10961160 ~ 10987235 (-) False G76622
TU113383 lncRNA upstream 506210 10986399 ~ 10987235 (-) True G76622
XM_043250872.1 mRNA downstream 79835 10390116 ~ 10398224 (-) False cnih2
XM_043250873.1 mRNA downstream 80001 10390116 ~ 10398058 (-) False cnih2
XM_043250874.1 mRNA downstream 80414 10390116 ~ 10397645 (-) True cnih2
XM_043250725.1 mRNA downstream 93411 10383532 ~ 10384648 (-) True LOC122352948
XM_043250724.1 mRNA downstream 94727 10382676 ~ 10383332 (-) True LOC122352947
XM_043250831.1 mRNA upstream 1464 10481653 ~ 10762897 (-) False auts2a
XM_043250826.1 mRNA upstream 1464 10481653 ~ 10762896 (-) False auts2a
XM_043250828.1 mRNA upstream 1464 10481653 ~ 10762896 (-) False auts2a
XM_043250830.1 mRNA upstream 1464 10481653 ~ 10762896 (-) False auts2a
XM_043250827.1 mRNA upstream 1464 10481653 ~ 10762896 (-) False auts2a
TU113101 other downstream 94750 10380096 ~ 10383309 (-) True G76438
TU113103 other downstream 94750 10380096 ~ 10383309 (-) False G76438
TU113102 other downstream 97012 10380096 ~ 10381047 (-) False G76438
TU113078 other downstream 200358 10267354 ~ 10277701 (-) True fgf13b
XR_006251964.1 other downstream 852654 9589980 ~ 9625405 (-) False LOC122353179
XR_006251870.1 other upstream 496139 10976328 ~ 10983737 (-) False rps6kb1a
XR_006251871.1 other upstream 497747 10977936 ~ 10983738 (-) False rps6kb1a
TU113393 other upstream 536921 11017110 ~ 11038731 (-) True G76625
XR_006251915.1 other upstream 696380 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other upstream 696380 11176569 ~ 11205227 (-) False LOC122352715

Expression Profile