RNA id: TU113584



Basic Information


Item Value
RNA id TU113584
length 571
lncRNA type read_through
GC content 0.42
exon number 2
gene id G76755
representative False

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11701871 ~ 11766210 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATTGGGAATTAGTcaccattttattcatttaaagcattgAGGCAGTTGGAAAAGGCTTCTGAATCTCACATTTCACAAGCCGATAAATAGGTTGTGCAATCTAGGTAGAAAAATCTGTTCCCTGTGATCTGGAAATGTGATCCCTTaatccccttttttttttaattgcaacaaTCTCTCTGTAAGTTGAAGTCATCCAAAACTTTAGAAAGAATTTTAGACAAGTCCAACTACAGAGGGCAACAGTAAACATTGCTATGGAGGTAGCAGTGGCTTTGGAATGGCTTAGTCGACCTCCTCAATGGTTGGGCCGGAGGATCCACCTCCTGGTGCAGAGCCAGCTCCTGGGAAACCACCGGGCATACCATCAGGCATTCCACCTGGCATGCCTCCAGCACTCTGGTACAGCTTGGTGATGATGGGGTTGCATACCTTCTCCAGCTCCTTCTGCTGGTGCTCAAACTCTTCCCTCTCGGCAGTCTGAAAGCAGAAATAAGGATTAAGTCACTCTGAATCaagtgctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113507 lncRNA downstream 116911 11505310 ~ 11584960 (-) False ccdc83
TU113502 lncRNA downstream 215443 11485906 ~ 11486428 (-) True G76693
TU113433 lncRNA downstream 411031 11218169 ~ 11290840 (-) True G76657
TU113438 lncRNA downstream 466181 11234372 ~ 11235690 (-) True G76662
TU113412 lncRNA downstream 591036 11096963 ~ 11110835 (-) True G76642
XR_006251968.1 lncRNA upstream 682332 12448542 ~ 12453651 (-) True LOC122353234
TU113766 lncRNA upstream 839009 12605219 ~ 12610098 (-) True G76902
TU113778 lncRNA upstream 912157 12678367 ~ 12678625 (-) True G76912
TU113780 lncRNA upstream 912797 12679007 ~ 12679218 (-) False uvrag
TU114135 lncRNA upstream 1030454 12796664 ~ 12880735 (-) False G77135
XM_043250948.1 mRNA downstream 168866 11530837 ~ 11533005 (-) True tmem126a
XM_043250947.1 mRNA downstream 169385 11530837 ~ 11532486 (-) False tmem126a
XM_043250114.1 mRNA downstream 191407 11506201 ~ 11510464 (-) True ccdc83
XM_043250856.1 mRNA downstream 235033 11458833 ~ 11466838 (-) True zpld1a
XM_043250117.1 mRNA downstream 244369 11452623 ~ 11457502 (-) True si:ch211-103f14.3
XM_043250865.1 mRNA upstream 15286 11781496 ~ 11784153 (-) True bsx
XM_043250981.1 mRNA upstream 20200 11786410 ~ 11787673 (-) True lim2.1
XM_043249820.1 mRNA upstream 299721 12065931 ~ 12186096 (-) False opcml
XM_043249818.1 mRNA upstream 299721 12065931 ~ 12128903 (-) True opcml
XM_043249837.1 mRNA upstream 450880 12217090 ~ 12283587 (-) True LOC122352422
XR_006251915.1 other downstream 494619 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other downstream 496644 11176569 ~ 11205227 (-) False LOC122352715
XR_006251917.1 other downstream 496645 11176569 ~ 11205226 (-) False LOC122352715
XR_006251916.1 other downstream 496645 11176569 ~ 11205226 (-) False LOC122352715
XR_006251914.1 other downstream 496645 11176569 ~ 11205226 (-) False LOC122352715
TU113815 other upstream 1016143 12782353 ~ 12789090 (-) True mogat2
XR_006251934.1 other upstream 1772519 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 1877081 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 2039909 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 2436052 14202262 ~ 14204127 (-) True G77440

Expression Profile