RNA id: XM_043250580.1


Basic Information

Item Value
RNA id XM_043250580.1
length 5302
RNA type mRNA
GC content 0.43
exon number 15
gene id uvrag
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 12678990 ~ 12769417 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCAATAGGCATCATGCGAGGGTTTGCCGATCAAGGTCGCGGTAATGGCTTCCTAGGCAAGACTTACTTTGTTTATGCCGCCGTAGGGACTCCAGCAGCAGCGTTTAGCGGGCTCAGTGTACGTTATATTACAGTTCTGCACGTGTGCGAAGAAAACTCGGACGCTGACACCTTCGTGAGCCGAGAGTTTCCCGCCGACGGGACTGAGTTGTATGGCTGAATGAGGCCATCGCCTGTGGTACCGTAGAAGGATGAACTCCATCGCCGGTCGGGATCTCGCAGTATCCGCTGGAGCTGTCAGCAGCAACCCCGGAGCAGCGTCCTCCAGAGTCCTGCATGTGGAGCTCACATCGCAGCAGAGGCGTTTACGTCACTTGCGGAGCATAGCAGCCCGTAACATTGTGAACAAGAATGGCTCTCCTCTGCTTGACACTTACTTCACCCTTCACCTCTGCCAGGAAGATCGGATATCACGAGactTTTATAAGAGTGAAATCATCCGGGACTCATTGaacCCAACATGGCGGAGCTTAGATTTCGCAATGCTTCCGGATCTCTTAGACACATCTGTGTCCTGTTTTGTGGTGAGAATATGGGGTGGGAGGGAAGAACAGTACCAACTGCTTATTGAGTGGAAGGTCAACCTAGATGGGCTCAGATACACAGGACAACAGATTCGCTCCAGAAATCCAAATGAGATCATATTTGGACTGAACGATGGCTACTATGCAGCTGAGTTTGATCAGAAGGAAAGTTCTGACAGGAAGAAGAACAGTTTGCTTCAGGTGGACCAGAGCTCCGTCAGAAACTCCTACAGTGTTTTCTCTTTACTGAGACTGCACACGGCCCAGAGAGCCATTAAACAGACTCAGGTGACCGTTCAGAAGATCGGGAAGGAAATTGAAGAGAAACTGAGGACAACGGCGTCCTGCACAGAAAAGaaaaaagagagagagtgtatgcAGCTTCGTATCGGGATTCTGAGGTGCGAGttggagagacagagaaaggcGTTGGCGAGAGAAATGGACATGatgcagaaagagagagtgcaGCTTGTAAAGAAAGAGGAGGCGTCATCTACCAAGCATCAGGGCCTGGAGTCTGAGCGCAAGTCTTTAACGGAGTTACAGAAGGAATGCACTGCCAAAAGAGAGCTGTTTCTGAAATCCAACGCCCAGCTCACCTTCCGCTGTCGTCAGCTTATATCAGAGCTGTCCTACATTTATCCCATTGATGTGAACAATCAGAATGATTATGTGATATGCGGTGTCAAACTGCCCAATTCTGAAGACTTTCAAGCAAGGGATGATGGGAGTGTTGCGGTGGCTCTGGGTTATACGTCACACCTGGTGCTGATGATATCGAACTTCCTGCAGGTTCCGCTCAGGTATCCAGTCATCCACAAGGGTTCCCGCTCCTCCATCAAAGACACCATCACTGACAAACTctcagagaaggagagagaGTTCCCTCTTTACCCCAGAGGAGAGCGTTTCCAGTTTGAATACGGTGTCTACTTGCTCAACAAAAACATCGCCCAGTTGCGGTATCAGCATGGGCTCTCCACCCCAGATCTGCGTCAGACTTTACCCAACCTGAAGAACTTCTTAGAGCATGGGCTACTTGTACGATGAGTGGCAGGAAGTAAAGGAGGAAGTGGAAGTCCGGCAAACCGGCGGTTGCACTGCATGGCTAAATGGACCCGGAGGGCGGTCGTGTTGACTCGACGGTACACTTAGAACCGTGAAAGAGCAGTTTCCGCCTCCCCCGGGGAGAGAGGGACcgtatacacaaacacaaaactgtaGAACATTCCTTTCAACCTCTTCCTCATACAGCGCCACAGCCGTAAACGATAACTTACAGCACCCTCCTAGAGTCAAGTTACTGTACATAGAGTGGGCGTCTTCTAGCATTAATAGGAGGTCTAGACTCGTTCTCCAGAGCAGGAAGCAACTCTCTGGATCCAGagctgaaatgtgaaatatagaGTAAATGGATTCTTTTATTTTCCGTTTGTTGCAGACTGCTTTTATTACTCTTGCATTCACTTCCTCTCCTACACTCCCTCCTCTCTTAGTTTAGATAATGTTTCCAGGGCAGAGGCCAGAGATGTGAATTATCGGCGCATAAAAATCTGCATTAGGGCAGCTGCAGGAGTTCCTTAGAGGGGAAAAGAAGGGACGGGAAAACCAGAGAAAGCACATGAAGAAGTGGTAACGCTGCACAGGTGTACCATGGAAACCTGTGCTGTCATAGTGCAGATCCAGTGGAGAGTATGTTGGGAAAATATGGAGATTTATTTTGCCCTTCTTCTTTAATCCCAACGGACGTTCATATTGAAAAGGGAGATGGCAGAGTTTTCGAGACCGGCTTAATGAAATGGTTTGATCTGTTCAAATTTGTTTTAAGAGTTGACAGGGTCTGAACACACACAGCTTCGCCATCTGCTTTGGGTGTTCAGGAGTTTTGCATGTCTTACAACCAAATTTCTGAACAGGGGTTATTAATGTTTGATCGTTTAGCAGAACCGTTGGCTCAGACCGCTGGACTCAGCATGTGTTTCAGCTCGATTTACTGACTGGACGATAAAGTAAAGAACTTTTTTCATGGGAAAACTACCTGGTTCCAAGTTCTTTAGAATTGTTTCAAGAATACACGGATTGAATCGCCAAGTCATTATTTCCATTACATCATTATTGGTCATCACAGAGACTACCAACCATTTTTggcatatttatttgattgtaagttgtgtgaaaaaaaaaaaaaggtttgaattgTCTATCTGGTTGTCAATCCTTTAGTCTACTGGCCTTTTAAGATCTTATGTAGGAACTTAATGCTGCCTTCCAAATTGGAAAGCTGACATTCCCaactttatatttagaattaattagTTAAACTCTGTTTGAAGTTGGACTCAATTTTTTTCAACTAGAAATTTTAGATAATGATTACAAGAAACAAAATGCATCAAATACTCGAAGTTCCCACAATCCCAGAACTTAGCAAAATTTTGCAGAtagaatttaaaacatgttaaataatgcaCTTTTGTTAGACGTGCAGTTTggttttaatattaacaataatgatttgctttcttttacaccacctttaaagcaaaaatggttagaaatctgaaatataaataagaaatccCAAACACAACTTGGATAGAAAGCAGCAGTGCAACATATTGACTGAATTGTACTTCTGTTTCTATGaatattgtgtttgtttgttacaaaGCCCATGCAGAATCTGTGGAGCTGGCGTGTTGTGCGCTGAATTTGCGGGGGGGTGGGGGAAAGTACTATAGAACTTTTGTAAATGACAGACGTTTCAAATCTGTTAAGCTTTCAGTGGTTGTTgtgattaaaatgttaacatggCAGAGGCCTGTCGAACAAACTTATTCTGCTTATCTCACATCTCTGAGCCTTTCACCATCCTGTTGCTTTTTCCCATTCAAACACTGATCGGCAGTTATATTCATTCTTCGCTGCCTTCATCTGGAGCCATAATCACTCTCATGCATTCTGGCGGTTTCCTCTCCGCGTCAGTCCAGTTGGAGCAGGAACAGTCTGAGATGCCAAATGTGGAAGAAGAGCAAAATCGTGAGAGAAAAAGTCACAGTTTAGAGCAGTGGATGGAGTCTAAGAAGAAACAGAGAGTGAAGATGGTGAAAGGCAGACAGGGGGGTGCAAGACATGGTGCCGCTGTGTTAATGATGTGTCCTGCCGAGTTCAAACCGAAACATTCTCTTATTTATGGCACAGGACTCTGGCAGCGTTTTAGAGGACCTGTAGCCCCACCGTGGAGCTCTTGAGAGCGGGTAAAGACTTGGAAGTGAAGGGACTGATGAGACTCAACACCACAGGATGGAAGCTCTAGGGTGGGGTTGGAAGTTCTAAAGAATCCCTTGGAACACCTGGTGAAAGTGCAAAACCAGCAAACcataaatcttcatttttaatgttttttatttaagcatttcaaatttccaatttttttcactgactttatttaaatctaaaccCACCCAAGTTTAGCCTATGGCCCTGGCACAGACTCCCAAGATCCACCCATCTACAGTAAATTCTGTAACTTGCCACCATATTTGGAAAGATTCAGGTGGATTCTTTTCCATCTCTTTGGAAACATGAATCATCAGGCAACTATTTTATTGTACATCTTTTCAACAAGCTTTTGCTAATCCAGTATATAAATGGCTGTCAAATAGCTTGAAGGAAGGTCTGATTAAtaacaaacaatgtttttggATGTCCACCCATATAGTAATCCTTTAATCCTGGGTACACTTTGATATAAAGGTCCTTTCGATGTTAAAGTACCTTCTCTTATGCCAGTTCAATGTGCTAAGACAACTGCAAGTGAGCCGTTCTTGGTTGGTTTCTTTAAAACCTgtaaacacagagaaacacaggtGTCCCAAATGCAGCATAAATTATTTGCTAAGTACATGctgaaatgcatatattttatactgtatgtactgtattgAATCAGAGCGAGAACCTTTTGGAACTGTCTGGGTAGATTTGCACAGTGGGATAAAGCTGTCTCTGTGGATAACATACTGATAGGTGTTTGTACTCACATCTGGTGGAACGTTCCTCTAAAATTCCATCAGCGTTCCTCAAATGTTCCTTTATTCTTGACACAGTCatcccatcaaaaaaaaaaaaacgatggcGACTTTGGCCTTATTTGCCACTTACCCTTAAGTGCCGGAAACAGTTCCATGTGTGATCATTCTTctcattgtacatttttatgaagGTCGTAAGTGGGACGTAAACAGTTTGAGGCTTTGAAGCATTATTGCTGGTGCGTATCCAGAACGGGAATACAGGAAACAATTTGTCATCCccataaacaatgcatttttatgtcaaTAGGTAAATTAGCACACAGGCATTTTTGCGAACGCAGGCCAGCCCTTCGATAATCTGAAAAAGATGCTTCTCTCAGTTTCTTGGATCCAAAAACAACAGCGgaaaatgtcatatttcattttcttaGCCATATCCTCAAACGAACTAGGGAATGCATGCTCAGCTCACTTGCAGCATAAATGGTATAACTTGCAAATGTAAAttctattaatcaaaattactttttttatttatttttttaaatttattatgaCAGGACAGATCAGAACTGACAGGAAGCAAAGTGGAAGAGAGACAGAAGATGAGATCAGGAAAGGTCCTAAAGTTAGGATTCGAATTTGGGACGCCCGTAGCGcgcaatttaatttataataa

Function

GO:

id name namespace
GO:0010508 positive regulation of autophagy biological_process

KEGG:

id description
K21249 UVRAG; UV radiation resistance-associated gene protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113780 lncRNA downstream 6137 12679007 ~ 12679218 (-) False uvrag
TU113778 lncRNA downstream 6730 12678367 ~ 12678625 (-) True G76912
TU113766 lncRNA downstream 75257 12605219 ~ 12610098 (-) True G76902
XR_006251968.1 lncRNA downstream 231704 12448542 ~ 12453651 (-) True LOC122353234
TU113588 lncRNA downstream 919145 11761717 ~ 11766210 (-) False G76755
TU114135 lncRNA upstream 27248 12796664 ~ 12880735 (-) False G77135
TU114128 lncRNA upstream 105135 12874551 ~ 12878653 (-) True G77135
TU114167 lncRNA upstream 252237 13021653 ~ 13103059 (-) True G77153
TU114171 lncRNA upstream 264325 13033741 ~ 13035585 (-) True G77157
TU114230 lncRNA upstream 441200 13210616 ~ 13210946 (-) True G77208
XM_043250281.1 mRNA downstream 175447 12505012 ~ 12509908 (-) True vps26bl
XM_043250469.1 mRNA downstream 184506 12491670 ~ 12500849 (-) False fez1
XM_043250468.1 mRNA downstream 184508 12491670 ~ 12500847 (-) True fez1
XM_043250813.1 mRNA downstream 308090 12311190 ~ 12377265 (-) False robo3
XM_043250875.1 mRNA upstream 2010 12771426 ~ 12779789 (-) True dgat2
XM_043249974.1 mRNA upstream 13483 12782899 ~ 12789095 (-) False mogat2
XM_043249841.1 mRNA upstream 37868 12807284 ~ 12817597 (-) True umodl1
XM_043250185.1 mRNA upstream 57506 12826922 ~ 12828717 (-) True atg101
XM_043250186.1 mRNA upstream 57506 12826922 ~ 12828632 (-) False atg101
XR_006251915.1 other downstream 1478103 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other downstream 1480128 11176569 ~ 11205227 (-) False LOC122352715
XR_006251917.1 other downstream 1480129 11176569 ~ 11205226 (-) False LOC122352715
XR_006251916.1 other downstream 1480129 11176569 ~ 11205226 (-) False LOC122352715
XR_006251914.1 other downstream 1480129 11176569 ~ 11205226 (-) False LOC122352715
TU113815 other upstream 12937 12782353 ~ 12789090 (-) True mogat2
XR_006251934.1 other upstream 769313 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 873875 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 1036703 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 1432846 14202262 ~ 14204127 (-) True G77440

Expression Profile