RNA id: TU114454



Basic Information


Item Value
RNA id TU114454
length 232
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G77378
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13986935 ~ 13987166 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAACATTCCCAGagtctaaaaatgtatattctcaTTAATTTCACAGGCTCAGtacaatgtattttctttttagttgTGACTGTTACAGAATTTAATCACTGAGCATAAGATTTGAAAAATTCCAGTAaagaacagatttttattttatgtaataaattaaagtgTGCTAGTTTATTAACTTAAGTTTCCTTAAATTAGTTTGTTATCTTAACTCGTCGTTATAAACCAGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114408 lncRNA downstream 181606 13805089 ~ 13805329 (-) True G77352
TU114407 lncRNA downstream 182043 13804483 ~ 13804892 (-) True G77351
TU114402 lncRNA downstream 186023 13800013 ~ 13800912 (-) True G77347
TU114405 lncRNA downstream 195001 13791321 ~ 13791934 (-) True G77349
TU114360 lncRNA downstream 316489 13669972 ~ 13670446 (-) True G77315
TU114455 lncRNA upstream 7256 13994422 ~ 13994767 (-) True G77379
TU114469 lncRNA upstream 72273 14059439 ~ 14097135 (-) True G77390
TU114468 lncRNA upstream 89143 14076309 ~ 14097135 (-) False G77390
TU114539 lncRNA upstream 157725 14144891 ~ 14145304 (-) True G77432
TU114587 lncRNA upstream 304687 14291853 ~ 14292718 (-) True G77456
XM_043250045.1 mRNA downstream 179116 13806104 ~ 13807819 (-) True ovca2
XM_043250168.1 mRNA downstream 200273 13773844 ~ 13786662 (-) True smg6
XM_043250372.1 mRNA downstream 228676 13754169 ~ 13758259 (-) True si:ch211-244c8.4
XM_043250908.1 mRNA downstream 276487 13699234 ~ 13710448 (-) True gabrr3a
XM_043250276.1 mRNA downstream 302798 13681141 ~ 13684137 (-) True rhbdd2
XM_043249843.1 mRNA upstream 24378 14011544 ~ 14014981 (-) True LOC122352428
XM_043249845.1 mRNA upstream 29471 14016637 ~ 14017638 (-) True LOC122352429
XM_043249846.1 mRNA upstream 35669 14022835 ~ 14023833 (-) True LOC122352430
XM_043250877.1 mRNA upstream 39519 14026685 ~ 14027683 (-) True LOC122353045
XM_043249847.1 mRNA upstream 42985 14030151 ~ 14031155 (-) True LOC122352431
TU114409 other downstream 179295 13806119 ~ 13807640 (-) False ovca2
TU114352 other downstream 332556 13643291 ~ 13654379 (-) False ypel2a
XR_006251934.1 other downstream 443320 13538729 ~ 13543615 (-) False sparta
TU113815 other downstream 1197845 12782353 ~ 12789090 (-) True mogat2
XR_006251912.1 other downstream 2781709 11176569 ~ 11205226 (-) False LOC122352715
TU114554 other upstream 215096 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 215096 14202262 ~ 14202837 (-) False G77440
TU114556 other upstream 217250 14204416 ~ 14208006 (-) True G77441
TU114559 other upstream 247340 14234506 ~ 14264322 (-) True G77443
TU114597 other upstream 352880 14340046 ~ 14343012 (-) True G77465

Expression Profile