RNA id: TU114469



Basic Information


Item Value
RNA id TU114469
length 342
lncRNA type read_through
GC content 0.43
exon number 2
gene id G77390
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14059439 ~ 14097135 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGTTGCTGTCCTTGTTGGTCGAGTTCAGCAGTGGTCCCCTCACCATAGAGGATCACCTATGAGCACACCCCTCTCATAAACTGAGCGACTAACATGGGGTCTCTAGGCCTCTAACGATAGTCCATGTTATGGTGAAACAGATAAACAGGAATCATGAGCTCCATGCAGTCAGACTCCTCTGCAAATGCAACCTTTGTTCGTCCTGCTACATTTTATGTCAGTGACTTTTCTAATATCCCACATGCAAAATACTACTATGTGTTCCTGTCTTTAGTGTATGTTGTGACTGTTTTAGGAAATTCATTTATcatgtgtataatttatttggCCCGCAGACTCCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114455 lncRNA downstream 64672 13994422 ~ 13994767 (-) True G77379
TU114454 lncRNA downstream 72273 13986935 ~ 13987166 (-) True G77378
TU114408 lncRNA downstream 254110 13805089 ~ 13805329 (-) True G77352
TU114407 lncRNA downstream 254547 13804483 ~ 13804892 (-) True G77351
TU114402 lncRNA downstream 258527 13800013 ~ 13800912 (-) True G77347
TU114539 lncRNA upstream 47756 14144891 ~ 14145304 (-) True G77432
TU114587 lncRNA upstream 194718 14291853 ~ 14292718 (-) True G77456
TU114604 lncRNA upstream 264219 14361354 ~ 14361734 (-) True G77472
TU114621 lncRNA upstream 269146 14366281 ~ 14368555 (-) True G77476
TU114626 lncRNA upstream 327378 14424513 ~ 14425487 (-) True G77480
XM_043250857.1 mRNA downstream 2376 14056068 ~ 14057063 (-) True LOC122353024
XM_043250864.1 mRNA downstream 5359 14053056 ~ 14054080 (-) True LOC122353030
XM_043249849.1 mRNA downstream 13387 14043687 ~ 14046052 (-) True LOC122352433
XM_043249848.1 mRNA downstream 23115 14035335 ~ 14036324 (-) True LOC122352432
XM_043249847.1 mRNA downstream 28284 14030151 ~ 14031155 (-) True LOC122352431
XM_043250351.1 mRNA upstream 176515 14273650 ~ 14277332 (-) True LOC122352755
XM_043250350.1 mRNA upstream 180982 14278117 ~ 14280888 (-) True LOC122352754
XM_043250352.1 mRNA upstream 183798 14280933 ~ 14285082 (-) True LOC122352756
XM_043250845.1 mRNA upstream 378054 14475189 ~ 14481449 (-) False LOC122353009
XM_043250844.1 mRNA upstream 379054 14476189 ~ 14481449 (-) False LOC122353009
TU114409 other downstream 251799 13806119 ~ 13807640 (-) False ovca2
TU114352 other downstream 405060 13643291 ~ 13654379 (-) False ypel2a
XR_006251934.1 other downstream 515824 13538729 ~ 13543615 (-) False sparta
TU113815 other downstream 1270349 12782353 ~ 12789090 (-) True mogat2
XR_006251913.1 other downstream 2854213 11176569 ~ 11205226 (-) True LOC122352715
TU114554 other upstream 105127 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 105127 14202262 ~ 14202837 (-) False G77440
TU114556 other upstream 107281 14204416 ~ 14208006 (-) True G77441
TU114559 other upstream 137371 14234506 ~ 14264322 (-) True G77443
TU114597 other upstream 242911 14340046 ~ 14343012 (-) True G77465

Expression Profile