RNA id: TU114554



Basic Information


Item Value
RNA id TU114554
length 1086
RNA type TUCP
GC content 0.40
exon number 4
gene id G77440
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14202262 ~ 14204127 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tttatttctgtgatagaAAAGCTGTATTTCAGCAGTCACGATTTAATCTTTCAGAAATGCTGATTTGGTACGGAAAGTTTTcttattataaattttaaatgtatatctgcttaatatttttttgtggaaacagatTTGAATATATTCTTGCATCCTACCTGAATAAAGgtattatttctaaaaaatgaaatgaaatcaaataaaggacaaacaaaactaatggccctaaacttttgaacgctTGGTAGTGTGAAAACAGTCACGACAGAACATGAGGGGGTTGAAATCGGCGtggttgaaagaaaaaaaaaaaaaaagtaaagtcatGTATGATCTCCCATGATTCCTGGATGTTTAGTATCTGTGTCCTCTCTTAGACTTCTTTTAGGTGGTGGAGTGGAGCCCCTCTGTCCATCAGTGTTCACAGCACCATGACTCTGTTAAGACCCCGGAAAGTTTCTTTCATCATTAGATGATTTGTAACGCTCAGTACAGTTAAAACTAGCAAACTCATCACAAGCAATTGTATGATCTCAACCAAGAAAAGTATGATCAGCTTAAAAGCCTCAGTCACGTCTTGCCCTGGTTCTTAACactgccatctgctggtgaCAACCCTTAGTATTGTGTTTGTCGTATTCCTACGAACCttgtttttgtgtctgtgttcatTTTCCCTTTTTATGGTTTCAGAGCATGTAACGTCTAATGCCAGCGATAGTGAAAGTAGTTACCGTGGACAGGAAGAGTATGTCCTCTCGTATGAGACGGTCACGCAACAGGAAGTGAGTTATACTCGTCCGGTGATTATCCTTGGACCCATGAAAGACCGGATCAATGATGATTTAATCTCGGAGTTCCCGGACAAGTTTGGATCATGTGTTCCCCACACGACTAGACCAAAGCGAGACTATGAGGTCGATGGCAGAGACTACCATTTTGTTGTTTCACGGGAACAAATGGAAAAAGACATTCAAGACCACAAGTTCATCGAAGCAGGCCAATATAACAACCACCTCTACGGGACCAGCGTGCAGTCGGTGCGAGAGGTTGCAGAAAAGGTGCATGAGTTCAACTTGTTAGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114539 lncRNA downstream 56958 14144891 ~ 14145304 (-) True G77432
TU114469 lncRNA downstream 105127 14059439 ~ 14097135 (-) True G77390
TU114468 lncRNA downstream 105127 14076309 ~ 14097135 (-) False G77390
TU114455 lncRNA downstream 207495 13994422 ~ 13994767 (-) True G77379
TU114454 lncRNA downstream 215096 13986935 ~ 13987166 (-) True G77378
TU114587 lncRNA upstream 87726 14291853 ~ 14292718 (-) True G77456
TU114604 lncRNA upstream 157227 14361354 ~ 14361734 (-) True G77472
TU114621 lncRNA upstream 162154 14366281 ~ 14368555 (-) True G77476
TU114626 lncRNA upstream 220386 14424513 ~ 14425487 (-) True G77480
XR_006251945.1 lncRNA upstream 256241 14460368 ~ 14465320 (-) True LOC122353010
XM_043249850.1 mRNA downstream 105127 14057089 ~ 14097135 (-) True LOC122352435
XM_043249983.1 mRNA downstream 105137 14063166 ~ 14097125 (-) True LOC122352544
XM_043249988.1 mRNA downstream 129923 14071380 ~ 14072339 (-) True LOC122352549
XM_043249984.1 mRNA downstream 132629 14068591 ~ 14069633 (-) True LOC122352546
XM_043250857.1 mRNA downstream 145199 14056068 ~ 14057063 (-) True LOC122353024
XM_043250351.1 mRNA upstream 69523 14273650 ~ 14277332 (-) True LOC122352755
XM_043250350.1 mRNA upstream 73990 14278117 ~ 14280888 (-) True LOC122352754
XM_043250352.1 mRNA upstream 76806 14280933 ~ 14285082 (-) True LOC122352756
XM_043250845.1 mRNA upstream 271062 14475189 ~ 14481449 (-) False LOC122353009
XM_043250844.1 mRNA upstream 272062 14476189 ~ 14481449 (-) False LOC122353009
TU114409 other downstream 394622 13806119 ~ 13807640 (-) False ovca2
TU114352 other downstream 547883 13643291 ~ 13654379 (-) False ypel2a
XR_006251934.1 other downstream 658647 13538729 ~ 13543615 (-) False sparta
TU113815 other downstream 1413172 12782353 ~ 12789090 (-) True mogat2
XR_006251912.1 other downstream 2997036 11176569 ~ 11205226 (-) False LOC122352715
TU114556 other upstream 289 14204416 ~ 14208006 (-) True G77441
TU114559 other upstream 30379 14234506 ~ 14264322 (-) True G77443
TU114597 other upstream 135919 14340046 ~ 14343012 (-) True G77465
XR_006251944.1 other upstream 263059 14467186 ~ 14481449 (-) False LOC122353009
TU114670 other upstream 269993 14474120 ~ 14481437 (-) True LOC122353009

Expression Profile