RNA id: TU114604



Basic Information


Item Value
RNA id TU114604
length 292
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G77472
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14361354 ~ 14361734 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCAGaactaaagcatttaaaatcctgcgctttaataaaaaatgcgaacagAACATAATTTGTCCTCTCCAGCATCAGAACGCGACGTGGACTGATCATTAATGAGCCAGTGCCGGGCGACAGTTTCTTCTCCGCTTGTGAGTCCCACCTCAGAGTAACCAGAGACCTGAGCGCGCAGAGCTGCAGCCGAGGCCTGACTGCTATCTTTTGGTTTAATGAAGTCTGTGTTGACGTACAACAGAGAAGTCACCTCTTCAGAGTCAGGTACTTCCTGAGAGACAGGAGTGGTCGG

Function


GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114587 lncRNA downstream 68636 14291853 ~ 14292718 (-) True G77456
TU114539 lncRNA downstream 216050 14144891 ~ 14145304 (-) True G77432
TU114469 lncRNA downstream 264219 14059439 ~ 14097135 (-) True G77390
TU114468 lncRNA downstream 264219 14076309 ~ 14097135 (-) False G77390
TU114455 lncRNA downstream 366587 13994422 ~ 13994767 (-) True G77379
TU114621 lncRNA upstream 4547 14366281 ~ 14368555 (-) True G77476
TU114626 lncRNA upstream 62779 14424513 ~ 14425487 (-) True G77480
XR_006251945.1 lncRNA upstream 98634 14460368 ~ 14465320 (-) True LOC122353010
TU114679 lncRNA upstream 133764 14495498 ~ 14497454 (-) True G77514
TU114743 lncRNA upstream 226672 14588406 ~ 14589880 (-) False vwa3a
XM_043250352.1 mRNA downstream 76272 14280933 ~ 14285082 (-) True LOC122352756
XM_043250350.1 mRNA downstream 80466 14278117 ~ 14280888 (-) True LOC122352754
XM_043250351.1 mRNA downstream 84022 14273650 ~ 14277332 (-) True LOC122352755
XM_043249988.1 mRNA downstream 289015 14071380 ~ 14072339 (-) True LOC122352549
XM_043249984.1 mRNA downstream 291721 14068591 ~ 14069633 (-) True LOC122352546
XM_043250845.1 mRNA upstream 113455 14475189 ~ 14481449 (-) False LOC122353009
XM_043250844.1 mRNA upstream 114455 14476189 ~ 14481449 (-) False LOC122353009
XM_043249856.1 mRNA upstream 123065 14484799 ~ 14485292 (-) True im:6904045
XM_043250843.1 mRNA upstream 123595 14485329 ~ 14488534 (-) False dhrs7ca
XM_043250842.1 mRNA upstream 123595 14485329 ~ 14488534 (-) True dhrs7ca
TU114597 other downstream 18342 14340046 ~ 14343012 (-) True G77465
TU114559 other downstream 97032 14234506 ~ 14264322 (-) True G77443
TU114556 other downstream 153348 14204416 ~ 14208006 (-) True G77441
TU114554 other downstream 157227 14202262 ~ 14204127 (-) True G77440
TU114555 other downstream 158517 14202262 ~ 14202837 (-) False G77440
XR_006251944.1 other upstream 105452 14467186 ~ 14481449 (-) False LOC122353009
TU114670 other upstream 112386 14474120 ~ 14481437 (-) True LOC122353009
TU114673 other upstream 123083 14484817 ~ 14485270 (-) False im:6904045
XR_006251888.1 other upstream 207627 14569361 ~ 14589899 (-) False vwa3a
TU114878 other upstream 745403 15107137 ~ 15107752 (-) True G77671

Expression Profile