RNA id: XM_043249856.1



Basic Information


Item Value
RNA id XM_043249856.1
length 334
RNA type mRNA
GC content 0.51
exon number 2
gene id im:6904045
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14484799 ~ 14485292 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgtgtgtctgtggtgacGTCACAACATGGCGCGCTACATCCGTCGTTTCTCTCAAGGTTATAAAAACAATCAGCGACTCAGCAGATACACATTTCGTGGATGCACCAGCTTCTCGAATACAAACGTGATACACGATAGACAGAATCGGCGTTTCACGGTCACTCTTGACTGCGACGGAGCAGAGAGCAGTGCAGAACTGAAGTACGCCGTCAGAGATGATCGGGTGGAGTTGATCTCCACGGAGGTTCCTGAAACGCACCGGGGGAAAGGTGTAGCAGCTCACCTGGCAAAGGTGAAATCCATCTTCAGCTTCCTCTGGTGCCTCGGTTCTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251945.1 lncRNA downstream 19479 14460368 ~ 14465320 (-) True LOC122353010
TU114626 lncRNA downstream 59312 14424513 ~ 14425487 (-) True G77480
TU114621 lncRNA downstream 116244 14366281 ~ 14368555 (-) True G77476
TU114604 lncRNA downstream 123065 14361354 ~ 14361734 (-) True G77472
TU114587 lncRNA downstream 192081 14291853 ~ 14292718 (-) True G77456
TU114679 lncRNA upstream 10206 14495498 ~ 14497454 (-) True G77514
TU114743 lncRNA upstream 103114 14588406 ~ 14589880 (-) False vwa3a
TU114876 lncRNA upstream 616857 15102149 ~ 15103569 (-) True G77669
TU114879 lncRNA upstream 653315 15138607 ~ 15139007 (-) True G77672
TU114881 lncRNA upstream 671057 15156349 ~ 15156591 (-) True G77674
XM_043250845.1 mRNA downstream 3350 14475189 ~ 14481449 (-) False LOC122353009
XM_043250844.1 mRNA downstream 3350 14476189 ~ 14481449 (-) False LOC122353009
XM_043250352.1 mRNA downstream 199717 14280933 ~ 14285082 (-) True LOC122352756
XM_043250350.1 mRNA downstream 203911 14278117 ~ 14280888 (-) True LOC122352754
XM_043250351.1 mRNA downstream 207467 14273650 ~ 14277332 (-) True LOC122352755
XM_043250843.1 mRNA upstream 37 14485329 ~ 14488534 (-) False dhrs7ca
XM_043250842.1 mRNA upstream 37 14485329 ~ 14488534 (-) True dhrs7ca
XM_043250726.1 mRNA upstream 47195 14532487 ~ 14540838 (-) True si:ch211-165g14.1
XM_043250548.1 mRNA upstream 56238 14541530 ~ 14546151 (-) True mfsd13al
XM_043250044.1 mRNA upstream 69705 14554997 ~ 14568193 (-) False sdr42e2
XR_006251944.1 other downstream 3350 14467186 ~ 14481449 (-) False LOC122353009
TU114670 other downstream 3362 14474120 ~ 14481437 (-) True LOC122353009
TU114597 other downstream 141787 14340046 ~ 14343012 (-) True G77465
TU114559 other downstream 220477 14234506 ~ 14264322 (-) True G77443
TU114556 other downstream 276793 14204416 ~ 14208006 (-) True G77441
XR_006251888.1 other upstream 84069 14569361 ~ 14589899 (-) False vwa3a
TU114878 other upstream 621845 15107137 ~ 15107752 (-) True G77671
XR_006251922.1 other upstream 744677 15229969 ~ 15289672 (-) False LOC122352744
TU114910 other upstream 872393 15357685 ~ 15358232 (-) True G77702
TU115089 other upstream 1408391 15893683 ~ 15897098 (-) False npffr1l1

Expression Profile