RNA id: TU114883



Basic Information


Item Value
RNA id TU114883
length 383
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G77676
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15159465 ~ 15159847 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGTCTGTAGCTTTCATCGGGGCTTCTACCCTGTGTTCTGGGCTTTAGCGGTTCTGGGCATTCTCGGATATAATGGCCTTCTttgtggcaattaaaacacctaTCATATTCTTTGTCATCGCGTGTCTGTTTCGACAACCTTCTCTCTCTACCTTGACCAAGTGCTGCTTTCCTCCCCCTCCCTCTCCGATTAGCTTGGTAGAAGGTGTCTGCACCATGCGAGGCCCCGCCCCGGGAGAGGGCAGTGAGTGCAGCGAAAGTatgggccctgtctgctttttcttttttatttttcaacaatcccTGTCCATGTCTGGCATAATTCATTATGCTACTTACAGGGTCGGTGGaccagtttatattatatttttttatgtagtctGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114881 lncRNA downstream 2874 15156349 ~ 15156591 (-) True G77674
TU114879 lncRNA downstream 20458 15138607 ~ 15139007 (-) True G77672
TU114876 lncRNA downstream 55896 15102149 ~ 15103569 (-) True G77669
TU114743 lncRNA downstream 569585 14588406 ~ 14589880 (-) False vwa3a
TU114679 lncRNA downstream 662011 14495498 ~ 14497454 (-) True G77514
TU114900 lncRNA upstream 114066 15273913 ~ 15276004 (-) True G77692
TU114908 lncRNA upstream 185153 15345000 ~ 15347289 (-) True G77700
TU114911 lncRNA upstream 208554 15368401 ~ 15368676 (-) True G77703
TU114914 lncRNA upstream 232241 15392088 ~ 15394552 (-) True G77706
TU114936 lncRNA upstream 484556 15644403 ~ 15647863 (-) True G77715
XM_043249857.1 mRNA downstream 44017 15111412 ~ 15115448 (-) True LOC122352450
XM_043250046.1 mRNA downstream 530391 14620986 ~ 14629074 (-) True si:ch211-256e16.3
XM_043250047.1 mRNA downstream 540855 14611801 ~ 14618610 (-) True LOC122352591
XM_043250050.1 mRNA downstream 548242 14591019 ~ 14611223 (-) True mosmoa
XM_043250016.1 mRNA downstream 569570 14568330 ~ 14589895 (-) True vwa3a
XM_043250334.1 mRNA upstream 73294 15233141 ~ 15289672 (-) False LOC122352744
XM_043250333.1 mRNA upstream 73294 15233141 ~ 15289672 (-) True LOC122352744
XM_043249858.1 mRNA upstream 145688 15305535 ~ 15306408 (-) True LOC122352451
XM_043250086.1 mRNA upstream 148052 15307899 ~ 15314674 (-) False LOC122352614
XM_043250085.1 mRNA upstream 148055 15307902 ~ 15315868 (-) True LOC122352614
TU114878 other downstream 51713 15107137 ~ 15107752 (-) True G77671
XR_006251888.1 other downstream 569566 14569361 ~ 14589899 (-) False vwa3a
TU114673 other downstream 674195 14484817 ~ 14485270 (-) False im:6904045
XR_006251944.1 other downstream 678016 14467186 ~ 14481449 (-) False LOC122353009
XR_006251922.1 other upstream 70122 15229969 ~ 15289672 (-) False LOC122352744
TU114910 other upstream 197838 15357685 ~ 15358232 (-) True G77702
TU115089 other upstream 733836 15893683 ~ 15897098 (-) False npffr1l1
TU115119 other upstream 856824 16016671 ~ 16017770 (-) False LOC122352931
XR_006251960.1 other upstream 870680 16030527 ~ 16057307 (-) False cabp1b

Expression Profile