RNA id: TU114914


Basic Information

Item Value
RNA id TU114914
length 321
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G77706
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15392088 ~ 15394552 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTtgcttccaggcgcctgaatttgttctgtactgctgatgaacggacacagggggacgcatacactgaagaagagaagttcttacagttctgggggctcgtccgggatacaTCTGACCAGGCGGCCGCTACAGAAGCGGATGTGGCGTTTTGGATCTCTGAGGGAGCGTCAAAGAATAACGACGGTATTTTGGTTGACTCTTccggccgtgtgtgtgtgccagcctCCTGTGCCCCGTTCTTGGTAAGAGAGTTTCATGGTGTCACACACCGCGGCCGAAGAGGGGTATTGGATGAAATGACCAATTTTTGTGCATCCAA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
ko04640 Hematopoietic cell lineage

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114911 lncRNA downstream 23412 15368401 ~ 15368676 (-) True G77703
TU114908 lncRNA downstream 44799 15345000 ~ 15347289 (-) True G77700
TU114900 lncRNA downstream 116084 15273913 ~ 15276004 (-) True G77692
TU114883 lncRNA downstream 232241 15159465 ~ 15159847 (-) True G77676
TU114881 lncRNA downstream 235497 15156349 ~ 15156591 (-) True G77674
TU114936 lncRNA upstream 249851 15644403 ~ 15647863 (-) True G77715
XR_006251906.1 lncRNA upstream 432532 15827084 ~ 15827556 (-) True LOC122352661
XR_006251889.1 lncRNA upstream 436655 15831207 ~ 15831926 (-) True LOC122352573
XR_006251904.1 lncRNA upstream 444961 15839513 ~ 15840066 (-) True LOC122352641
XR_006251891.1 lncRNA upstream 445799 15840351 ~ 15842537 (-) True LOC122352598
XM_043250840.1 mRNA downstream 29812 15347467 ~ 15362276 (-) True mafga
XM_043250839.1 mRNA downstream 30266 15347467 ~ 15361822 (-) False mafga
XM_043251064.1 mRNA downstream 50123 15316648 ~ 15341965 (-) True LOC122353145
XM_043250085.1 mRNA downstream 76220 15307902 ~ 15315868 (-) True LOC122352614
XM_043250086.1 mRNA downstream 77414 15307899 ~ 15314674 (-) False LOC122352614
XM_043250901.1 mRNA upstream 288719 15683271 ~ 15684293 (-) True LOC122353069
XM_043249865.1 mRNA upstream 300868 15695420 ~ 15697678 (-) True LOC122352456
XM_043249866.1 mRNA upstream 310673 15705225 ~ 15706280 (-) True LOC122352458
XM_043250904.1 mRNA upstream 318829 15713381 ~ 15714427 (-) True LOC122353072
XM_043250883.1 mRNA upstream 322232 15716784 ~ 15717845 (-) True LOC122353050
TU114910 other downstream 33856 15357685 ~ 15358232 (-) True G77702
XR_006251922.1 other downstream 102416 15229969 ~ 15289672 (-) False LOC122352744
TU114878 other downstream 284336 15107137 ~ 15107752 (-) True G77671
XR_006251888.1 other downstream 802189 14569361 ~ 14589899 (-) False vwa3a
TU114673 other downstream 906818 14484817 ~ 14485270 (-) False im:6904045
TU115089 other upstream 499131 15893683 ~ 15897098 (-) False npffr1l1
TU115119 other upstream 622119 16016671 ~ 16017770 (-) False LOC122352931
XR_006251960.1 other upstream 635975 16030527 ~ 16057307 (-) False cabp1b
unassigned_transcript_1473 other upstream 724234 16118786 ~ 16118856 (-) True trnag-gcc_65
unassigned_transcript_1474 other upstream 724400 16118952 ~ 16119022 (-) True trnag-gcc_66

Expression Profile