Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043249827.1 |
| length | 1167 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 1 |
| gene id | prnpb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056708.1 |
| NCBI id | CM032077.1 |
| chromosome length | 16503406 |
| location | 6625432 ~ 6626598 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:2000047 | regulation of cell-cell adhesion mediated by cadherin | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0016338 | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0009986 | cell surface | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU111374 | lncRNA | upstream | 45503 | 6578172 ~ 6579929 (+) | True | G75236 |
| TU111367 | lncRNA | upstream | 81187 | 6542088 ~ 6544245 (+) | True | G75230 |
| TU111315 | lncRNA | upstream | 420511 | 6179206 ~ 6204921 (+) | True | G75192 |
| XR_006251905.1 | lncRNA | upstream | 434992 | 6186147 ~ 6190440 (+) | True | LOC122352660 |
| TU111146 | lncRNA | upstream | 649874 | 5942274 ~ 5975558 (+) | False | G75102 |
| TU111557 | lncRNA | downstream | 17438 | 6644036 ~ 6650405 (+) | True | G75361 |
| TU111558 | lncRNA | downstream | 17438 | 6644036 ~ 6655910 (+) | False | G75361 |
| TU111573 | lncRNA | downstream | 108334 | 6734932 ~ 6759645 (+) | True | G75371 |
| TU111608 | lncRNA | downstream | 355213 | 6981811 ~ 6985897 (+) | False | trpc7a |
| TU111609 | lncRNA | downstream | 366241 | 6992839 ~ 6993208 (+) | False | trpc7a |
| XM_043251081.1 | mRNA | upstream | 1218 | 6614030 ~ 6624214 (+) | True | si:dkey-81j8.6 |
| XM_043250508.1 | mRNA | upstream | 14557 | 6602377 ~ 6610875 (+) | True | letm2 |
| XM_043249826.1 | mRNA | upstream | 109505 | 6507050 ~ 6515927 (+) | True | r3hcc1 |
| XM_043250140.1 | mRNA | upstream | 119347 | 6502318 ~ 6506085 (+) | True | golga7 |
| XM_043249895.1 | mRNA | upstream | 170387 | 6454065 ~ 6455045 (+) | True | LOC122352486 |
| XM_043250756.1 | mRNA | downstream | 354894 | 6981492 ~ 6993621 (+) | True | trpc7a |
| XM_043250022.1 | mRNA | downstream | 437063 | 7063661 ~ 7076378 (+) | True | LOC122352574 |
| XM_043250026.1 | mRNA | downstream | 449963 | 7076561 ~ 7082454 (+) | True | LOC122352576 |
| XM_043250027.1 | mRNA | downstream | 449966 | 7076564 ~ 7082454 (+) | False | LOC122352576 |
| XM_043250023.1 | mRNA | downstream | 456374 | 7082972 ~ 7094576 (+) | False | fbxw11b |
| TU111380 | other | upstream | 153325 | 6454336 ~ 6472107 (+) | False | LOC122352486 |
| XR_006251967.1 | other | upstream | 535845 | 6061191 ~ 6089587 (+) | True | lrrtm4l1 |
| TU111087 | other | upstream | 1063347 | 5560651 ~ 5562085 (+) | True | G75062 |
| TU111017 | other | upstream | 1125128 | 5498681 ~ 5500304 (+) | False | ccl19b |
| TU110943 | other | upstream | 1366609 | 5256838 ~ 5258823 (+) | True | G74965 |
| TU111650 | other | downstream | 515695 | 7142293 ~ 7150581 (+) | True | G75422 |
| TU111651 | other | downstream | 526988 | 7153586 ~ 7161263 (+) | False | LOC122352414 |
| TU111652 | other | downstream | 526988 | 7153586 ~ 7161263 (+) | False | LOC122352414 |
| TU111639 | other | downstream | 581937 | 7208535 ~ 7221528 (+) | False | LOC122353118 |
| TU111640 | other | downstream | 616669 | 7243267 ~ 7257229 (+) | False | LOC122353118 |
