RNA id: XM_043249845.1



Basic Information


Item Value
RNA id XM_043249845.1
length 1002
RNA type mRNA
GC content 0.37
exon number 1
gene id LOC122352429
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14016637 ~ 14017638 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGAGCTCCATGCAGTCAAACTCCTCTGCAAATGTGACCTTTGTTCGTCCTGCTACATTTTTTATCAATGGTTTTTTTAATATCCCACATGCAAAATACTACTATGTTTTCCTGTCTTTAGTGTATGTTGTGACTGTTTTAGGAAATTCATTTAtcatgtgtattatatatttggCCCGCAGACTCCACACAGCCaaatatattgctgtttttcaCCTAGCTCTTTGTGATCTGTGTGGAAGCTCAGCTTTGATTCCAAAAGTCCtagacatgtttttatttgagcaCCAGGACATTTCCTATGAAGCATGTTtggcaaatatgttttttgtatttcatttcatgaaTCTCCAGTCTTTGACACTTCTCGCTTTGGCTTTTGACAGATTGGTAGCTATTTGTTTTCCTCTGCGGTATCATGTCATTGTAACCAAACCAGCCATGTTTCTGATCATAGGGGCGATGTGGatattttctgtcacttttattGCTTCAATGGTGATTTTGATCACAAGACTCTCTATTTGTAGATCTAACATAGTCAATAGTTATTTTTGTGATCATGGCCCTATTTATAGACTAGCTTGTAATGATAATACCATAAATAGTATTAtggcaaatatttgttttggtctCCTTATATGTATGCCGCTGATATTAATAATCATCTCATATTTCTGCATTGCTTTAGTTATGCTTAAGATTGCTCATGGTGTTGACAGGATCAAAGCCATGAAAACCTGCACCTCACATTTCATGTTGGTGGCAGTTTTTTATGTGCCACTTTTGGGTATTAATATTGCAGCTTTAGCAACATTTATCCATCCAAATGCCCGGATAATTAACAATTCTCTGACACAGACAATACCACCTCTGCTGAATCCCATCATATACACTCTAAAGACAGAGGAGGTCATGCAATCCGTCAAAGACCTGTACAAACGCAACAAAGTGAACACTAGGCTACTGCAGAGAAAAAGGCTAAATGCAAATGGTTATtga

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU114455 lncRNA downstream 21870 13994422 ~ 13994767 (-) True G77379
TU114454 lncRNA downstream 29471 13986935 ~ 13987166 (-) True G77378
TU114408 lncRNA downstream 211308 13805089 ~ 13805329 (-) True G77352
TU114407 lncRNA downstream 211745 13804483 ~ 13804892 (-) True G77351
TU114402 lncRNA downstream 215725 13800013 ~ 13800912 (-) True G77347
TU114469 lncRNA upstream 41801 14059439 ~ 14097135 (-) True G77390
TU114468 lncRNA upstream 58671 14076309 ~ 14097135 (-) False G77390
TU114539 lncRNA upstream 127253 14144891 ~ 14145304 (-) True G77432
TU114587 lncRNA upstream 274215 14291853 ~ 14292718 (-) True G77456
TU114604 lncRNA upstream 343716 14361354 ~ 14361734 (-) True G77472
XM_043249843.1 mRNA downstream 1656 14011544 ~ 14014981 (-) True LOC122352428
XM_043250045.1 mRNA downstream 208818 13806104 ~ 13807819 (-) True ovca2
XM_043250168.1 mRNA downstream 229975 13773844 ~ 13786662 (-) True smg6
XM_043250372.1 mRNA downstream 258378 13754169 ~ 13758259 (-) True si:ch211-244c8.4
XM_043250908.1 mRNA downstream 306189 13699234 ~ 13710448 (-) True gabrr3a
XM_043249846.1 mRNA upstream 5197 14022835 ~ 14023833 (-) True LOC122352430
XM_043250877.1 mRNA upstream 9047 14026685 ~ 14027683 (-) True LOC122353045
XM_043249847.1 mRNA upstream 12513 14030151 ~ 14031155 (-) True LOC122352431
XM_043249848.1 mRNA upstream 17697 14035335 ~ 14036324 (-) True LOC122352432
XM_043249849.1 mRNA upstream 26049 14043687 ~ 14046052 (-) True LOC122352433
TU114409 other downstream 208997 13806119 ~ 13807640 (-) False ovca2
TU114352 other downstream 362258 13643291 ~ 13654379 (-) False ypel2a
XR_006251934.1 other downstream 473022 13538729 ~ 13543615 (-) False sparta
TU113815 other downstream 1227547 12782353 ~ 12789090 (-) True mogat2
XR_006251913.1 other downstream 2811411 11176569 ~ 11205226 (-) True LOC122352715
TU114554 other upstream 184624 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 184624 14202262 ~ 14202837 (-) False G77440
TU114556 other upstream 186778 14204416 ~ 14208006 (-) True G77441
TU114559 other upstream 216868 14234506 ~ 14264322 (-) True G77443
TU114597 other upstream 322408 14340046 ~ 14343012 (-) True G77465

Expression Profile


XM_043249845.1 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.08.
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XM_043249845.1 Expression in each Bioproject

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XM_043249845.1 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 0.15.
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