RNA id: XM_043250014.1



Basic Information


Item Value
RNA id XM_043250014.1
length 1090
RNA type mRNA
GC content 0.51
exon number 4
gene id zar1l
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13309532 ~ 13311075 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCGCTTCTGCTCCTGATCACGCCGCAATGGAAGAGTTTCTCATTCCACCTTACAACTGTGGAGGTTACCCTGGCTATTTCCCCTTTTATCCCGGCAATGGGAAATTTAAACCCCAGAACTGGAACAAAAAGGGAAACAGTTTCTACGTTGCGCCAGACGCCCCCGATTATCTCGACTTTTACAAGCGCGCGCAGTTAAAAGCGATATTATCTCAGGTGAACCCGAACCTGACGCCGCGCCTCCGCAAGGCCAACACGAGGGAGTTCGGCGTGCAGGTCAACCCGAAGATAGACGCCACTGTCCAATGCTCGCTCGGGCCCAAAACGCTGTTTTATCGCGGTGATAAATGGGATTTAACGCTATCGAGGACGCCGTCCGTCAGCCCTCTGAAAGACACCCTGCCCAGCACGCCTGTCAACACCGTGCGCTTCTCGCGCCCCGTCGCCATCTACTCTCCCGTATTCGACCGCAGGATTTTCTCCTTATCCACGACTACCGGTGAAAGTAAGGACGAGGACGATGGAGAGGATGAGAGCAAGGAGACGGACAGCGAGACGGACGACGAGGAGAAGTGTAAACCGGATGAACCGACGCACAGCGAAACACCGCAGGGGAAGTCTGTGATTCAGCGGAATAAACGGTCAAACTTTCAGTTTCTGGAGCAGAAATATGGATTTTATCACTGCAGTAAGTGCAATATTCGATGGGAAAGTGCGTTTGTGTGGTGCATCTCGGGAACCTCCAAGGTGTACTTCAAGCAGCACTGCAGGAAGTGCCAGGCGGGACTGAATCCATATAGAGTGGAGTCCATTCAGTGCCAGGTTTGCTGTAAGACCCGCTGCTGCTGTGAACGGAAGCAGAGGCACATTGACATGCGCCGTCCTCACCGCCAGGATCTGTGCGGCCGCTGCAAGGGCAAAGGCCTTTCCTGTGACACCATCTACAGTTTCAAGTACATAGTGTGATTTGCGCCGGtctataaatgtgttttagaatCTTCATCGAGGGCTCAAGTGACGTTTTTGCGTGggatgtactgtatttttgtattataataaatttataaactAATAAAGTATTGCAGCATAA

Function


GO: NA

KEGG:

id description
K18762 ZAR1; zygote arrest protein 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114230 lncRNA downstream 98586 13210616 ~ 13210946 (-) True G77208
TU114167 lncRNA downstream 206473 13021653 ~ 13103059 (-) True G77153
TU114171 lncRNA downstream 273947 13033741 ~ 13035585 (-) True G77157
TU114135 lncRNA downstream 428797 12796664 ~ 12880735 (-) False G77135
TU114128 lncRNA downstream 430879 12874551 ~ 12878653 (-) True G77135
TU114244 lncRNA upstream 2119 13313194 ~ 13315574 (-) True G77220
TU114273 lncRNA upstream 17567 13328642 ~ 13328893 (-) True G77245
TU114322 lncRNA upstream 175192 13486267 ~ 13488833 (-) True G77284
TU114305 lncRNA upstream 189728 13500803 ~ 13505849 (-) False dclk1a
XR_006251929.1 lncRNA upstream 237179 13548254 ~ 13556657 (-) False LOC122352841
XM_043250494.1 mRNA downstream 123341 13178586 ~ 13186191 (-) True hunk
XM_043250500.1 mRNA downstream 140317 13164709 ~ 13169215 (-) True eva1c
XM_043250499.1 mRNA downstream 140320 13164714 ~ 13169212 (-) False eva1c
XM_043250501.1 mRNA downstream 148013 13156144 ~ 13161519 (-) True si:dkey-18a10.3
XM_043250502.1 mRNA downstream 153444 13151955 ~ 13156088 (-) True il2rga
XM_043250735.1 mRNA upstream 8800 13319875 ~ 13323889 (-) True rfc3
XM_043250602.1 mRNA upstream 181198 13492273 ~ 13533042 (-) False dclk1a
XM_043250601.1 mRNA upstream 181198 13492273 ~ 13533039 (-) False dclk1a
XM_043250599.1 mRNA upstream 181198 13492273 ~ 13533039 (-) False dclk1a
XM_043250604.1 mRNA upstream 181198 13492273 ~ 13505920 (-) False dclk1a
TU113815 other downstream 520442 12782353 ~ 12789090 (-) True mogat2
XR_006251916.1 other downstream 2104306 11176569 ~ 11205226 (-) False LOC122352715
XR_006251934.1 other upstream 227654 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 332216 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 495044 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 891187 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 891187 14202262 ~ 14202837 (-) False G77440

Expression Profile