RNA id: XM_043250191.1


Basic Information

Item Value
RNA id XM_043250191.1
length 2085
RNA type mRNA
GC content 0.46
exon number 2
gene id znhit2
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10375502 ~ 10377728 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ataaataaatgatttgttcgTCTCTAATGCTGTCTAGGTACAGGTCAACTTAAAGTCAACAAACCcgtaaagctttttttatttgcaaaatgacTATGAATGTACAACGTTTCAAATTGGTCGAAATGTAAGTAAATGGATAAAAGGAAACTCGTGCGCAAATACTGCGCAGCATTGACATTTGAAAAGCGAGGGCGCGAATACGTCATCATGTTGCGACGAGCATCGTTGTTCTGACGTGACGCTTTACTGTGAAAGCAAGTTTAAAATCACGGGCTGAAAAATATCTGGAGGTTTTTATATACGTGTTGGTGAATGTTTTATGGAATAGAAGTACGCATGCAGAAAAGTCCGTCAGaTCTGAAAATTAATGCCAGTGCAGTCTACCTCGGTAAATTAGCTGCTCATGGATCCTGTTAGACGTAAAATCCCTGCGTGCGTTCGTTCGTTACTCAGCGATACTGCCCCGAAAGAGGAGGAACACTTCAGCGACTGGCCTGAAACTGACTCCCAATCAATTACCACCAAAGATGGGATCGCACTGCCCCAAAGAGGGACTTCTGAAGCTCTTTTGAACCCTGCTGATGGGACAGCGGCTGGAACTACTGCATCAGTCAAACCGTGTGGGCTTTGCCTGTCCAAACCCTCCTGTTACACTTGCCCGAGGTGTAATGTCCCATATTGCGGATTGGCATGTTATAGGAGTCAGAATCACTCTTTATGCTCAGAGGAGTTTTATAAAGAGTCCGTGCTGCAGGAACTGAAATCCCAAGGTGTCTCAGACGAGGAAGGGAAAAGCAAGATGCAGGAAATTCTGCTCCGGCTCAGACAGAGCGCAGAGAGCGAGGGAGGAATGGAGAATTTATTAAGGACCCTGGGAGAAGATGAAACCAGTGTGACCGAAAACGACGCACATGCTTTGGAGCTGCTCTCTCGGTTAGCAGAGATTCAATCTGGCGGAGATGAAATGAGTCACGAGACAGAAGAGATACTAGCAAAACTCAGAGACATTGAAGATGGGAGTGATGAAGAGGAAGCTGGTGTAGCTGAGAAGTTAGCAGGCCTGGATGTTGACTCTCTTTCAGAGGAAGAACTCTGGTTGTTGTTGTCAGCCCAGGAAAAGGAGAAATTTGAAAGACTGGTGAAAGAAGGTGGCATTGGTGGACTGGTTGACCTGTGGAGCCCCTGGTGGGAACGGCATGAGAAAGATGCTAAAGCACTTATTGAGGAATTTACGTCTGAGAATGACGAAGAAATGCACAATGTGAATGTTAAAAAAGACAGTCAAAATAAAGTCAGTAGCAGTGAAGTAAAATCTGCCGAATCACTGAAAAGCGCAATCCCTCCAATAAGTGCAAAAATTGCTCCTCTTCACACGTTATCTTCAAAGCCATCTCCTCTAGTGGGGTACAGCCTGATCAGTGGTCTTTATGGATACGCCTTCTCACTGTGTCTCTATAATGGAGACATCTCAGAGATGTCGCTTGAGTTCTGTCAGGCGGTGCTTGCCGTCTCGGAGGGTTTGGGTGCCGGACGGGCCTTCAACTCTGTCTCTGAGGTTCTCGAAGCCGGAATGAGAGCCGTATCTACAGGAGGATACTTCGATCTTGAGGACCCTTTAGCTCCTCTCCGAGCTGTGGAAGCTGTGGCTCATATTCTGACTGGAGGGAGCAGAGAGGACGCTGTGGGATATTCTCTGTCCGCTCTGTCCCAGCTGCGCACCGCTTTCAGCAAGGCGAAGGCTTCTGTTCCTAAGGAAGACGAGCAGACGAGGCGGATGTATTTTCAAGCTGGAAAGAAGTGCGAGTTTTTTCAGTCTTGGGTTAAAGAGAATCCCAAAGTTTTGAGGAGTCTCGCAGGATGTGTGTGGATGGACTATGAGAGAAGGGAGATGGAGAGGATGAGATTAGAGGGAGAGAAGAAATGCTTAGAAAAGGGACGGGAAAAAAGTAAAGGAGCTCTGATAGAAGAAATTGAGTGAttgtattgtttgtatttttaaagaaaaaaggaaaaagtaatcaaataaaactgtattacaAGCATTTGTGGCTGAAGAATTAAAAAAGTAGTTtgaagtgcccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113081 lncRNA downstream 58102 10317071 ~ 10317400 (-) True G76426
TU113074 lncRNA downstream 121641 10253025 ~ 10253861 (-) True G76421
TU113066 lncRNA downstream 133320 10241959 ~ 10242182 (-) True G76413
TU113040 lncRNA downstream 190980 10184094 ~ 10184522 (-) True G76388
TU112932 lncRNA downstream 269323 10098265 ~ 10106179 (-) True G76327
TU113138 lncRNA upstream 26229 10403957 ~ 10411838 (-) True G76458
TU113174 lncRNA upstream 46887 10424615 ~ 10445156 (-) True G76488
TU113180 lncRNA upstream 58464 10436192 ~ 10460399 (-) True G76489
TU113191 lncRNA upstream 77863 10455591 ~ 10456512 (-) True G76493
TU113376 lncRNA upstream 494078 10871806 ~ 10872087 (-) True G76618
XM_043250131.1 mRNA downstream 72476 10289532 ~ 10303026 (-) False LOC122352632
XM_043250132.1 mRNA downstream 72478 10289532 ~ 10303024 (-) False LOC122352632
XM_043250130.1 mRNA downstream 72479 10289532 ~ 10303023 (-) True LOC122352632
XM_043250135.1 mRNA downstream 91837 10267527 ~ 10283665 (-) False fgf13b
XM_043250851.1 mRNA downstream 184272 10184794 ~ 10191230 (-) True LOC122353016
XM_043250195.1 mRNA upstream 136 10377864 ~ 10379018 (-) True mrpl49
XM_043250197.1 mRNA upstream 2688 10380416 ~ 10381074 (-) True LOC122352676
XM_043250724.1 mRNA upstream 4948 10382676 ~ 10383332 (-) True LOC122352947
XM_043250725.1 mRNA upstream 5804 10383532 ~ 10384648 (-) True LOC122352948
XM_043250872.1 mRNA upstream 12388 10390116 ~ 10398224 (-) False cnih2
TU113078 other downstream 97801 10267354 ~ 10277701 (-) True fgf13b
XR_006251964.1 other downstream 750097 9589980 ~ 9625405 (-) False LOC122353179
TU112582 other downstream 945702 9427962 ~ 9429800 (-) True G76068
TU112377 other downstream 1819414 8545367 ~ 8556088 (-) False G75913
TU112375 other downstream 1829350 8543097 ~ 8546152 (-) False G75913
TU113101 other upstream 2368 10380096 ~ 10383309 (-) True G76438
TU113102 other upstream 2368 10380096 ~ 10381047 (-) False G76438
TU113103 other upstream 2368 10380096 ~ 10383309 (-) False G76438
TU113196 other upstream 100331 10478059 ~ 10480189 (-) True G76498
XR_006251870.1 other upstream 598600 10976328 ~ 10983737 (-) False rps6kb1a

Expression Profile