RNA id: XM_043250341.1


Basic Information

Item Value
RNA id XM_043250341.1
length 1505
RNA type mRNA
GC content 0.48
exon number 5
gene id ak3
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1545460 ~ 1550935 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGGCTTAATCCGGGAATAAAGCTGGAGCTGCGCGCGCGTGACAGAGAGAGGTCTCCGCATCCCATAAATCAGACTTCACAAGATGCAGTGAAGAGGACGCGTTTATTTGACTCCACGTTCACAAACAGCCATGGGTCTGCAGACTGTGTTCCGCGCGGTGATCATGGGGGCCCCGGGCTCGGGGAAGGGGACCGTGTCCGGCCGGATAGCGCAGAGTTTCGCGCTCAAGCATCTCTCCAGCGGAGACCTGCTGCGGGCCAACATCGAGGCCAAGACGGATCTGGGTCTCCTGATGAAGTCGTGCATCGATCAGGGTCAGCTGGTTCCCGATGACGTCATCTCCCGTCTCATCCTGTCCAGTCTGAGGGGTCTGGAGCAGAGCGGCTGGCTGCTGGACGGGTTTCCTCGTACCGTGGCTCAGGCCGAAGCCCTGGACAGCGTGTACGATGTGGACTCCGTCATAAACCTGGACGTGCCTTTCCGGACGATCCGCGAGCGCCTGACCTCTCGCTGGGTGCACCTTCCCAGCGGCAGGGTCTACAACACGGACTTCAACCCGCCTAAGAAACCAGGTTTCGATGACGTCACAGGAGAAGCGCTGGTCCAGAGAGATGATGACAGCCCTGAAACGGTGTCCAGGAGACTGAAGGACTACGAGAGACAGACACAGCCGGTTCTGGAGTACTACAGGAGTAAAGGAGCGTTGGAGACCTTCTCAGGAACCGAAACCAACAAGATATGGCCTCACGTTCATGCCTTCCTGAGCAGGAAAATCCCAGGAAAGCAGCAGGTTATGGGAAAAGCGTGATTGCACAACAGCCTTGAGGACTTTCACCACAGCTGAAGTACACTGTCGGACTCGAGCACAATGCACCTCTGTAGCCTTAAGCGGTCTGCTGTATTCGTCCAAGCCTTTGGTGTCACCATCTGGTTTTATGCCTTTGAAAGAAAGTTAGTGCCAAACTAGGTTTGTGGTTGAACTAGTCTATTACTGAGCTCCAGCGCTGTCAGCTTAAGGAAGTAAACCCAGCTTAGAGAGTTAGAAGTAGGCGTGCTAAGATTAATAGTTGACTCCAAAGTTAATAATTCTTAAATTTCCAGTTTGGAAAGCGCccaacccatttttttttttcttttcttttaaccGAAGTGGCTGCAAAGTGTGAACACGGCAGCTCTAACACATTCCAGTTTATTGTCCATAATGGCATTTTAATGCGCATACtagattcattttaacatttcgCAAATTAATGCATAGCAAAGTTACAATTCCAGCCTGATTTTTGAATgttctgacatttttttgtacGAAACCACCATGGCCTTAACTAGCAAAAAACTAATGATCAGTCTAATGACTGTGTGGTGATTTTTCTACTGCAGATCATAcgaatgttgatatttttgcaaatgcaaaataatgtatttttaattaaaaaagagtttgcacaataaataataaagggaAAGAAAATCTATAATGTGatcaaaattcataaaa

Function

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004017 adenylate kinase activity molecular_function

KEGG:

id description
K00944 AK3; nucleoside-triphosphate--adenylate kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU109617 lncRNA downstream 8966 1534739 ~ 1536494 (-) True G74074
TU109613 lncRNA downstream 49590 1495269 ~ 1495870 (-) True G74071
TU109544 lncRNA downstream 71582 1466751 ~ 1473878 (-) True G74031
XR_006251953.1 lncRNA upstream 2627 1553562 ~ 1557279 (-) True LOC122353052
TU109624 lncRNA upstream 26541 1577476 ~ 1582603 (-) True G74076
TU109644 lncRNA upstream 40606 1591541 ~ 1660886 (-) True G74092
TU109620 lncRNA upstream 41239 1592174 ~ 1717319 (-) True G74075
TU109640 lncRNA upstream 107599 1658534 ~ 1660563 (-) True G74090
XM_043250459.1 mRNA downstream 12802 1493595 ~ 1532658 (-) False exd3
XM_043250460.1 mRNA downstream 12859 1493595 ~ 1532601 (-) True exd3
XM_043250464.1 mRNA downstream 12862 1493595 ~ 1532598 (-) False exd3
XM_043250461.1 mRNA downstream 12862 1493595 ~ 1532598 (-) False exd3
XM_043250462.1 mRNA downstream 12868 1493595 ~ 1532592 (-) False exd3
XM_043250770.1 mRNA upstream 41463 1592398 ~ 1649961 (-) False ptbp3
XM_043250769.1 mRNA upstream 41463 1592398 ~ 1649961 (-) True ptbp3
XM_043250772.1 mRNA upstream 41463 1592398 ~ 1649960 (-) False ptbp3
XM_043250774.1 mRNA upstream 41463 1592398 ~ 1649960 (-) False ptbp3
XM_043250771.1 mRNA upstream 41463 1592398 ~ 1633830 (-) False ptbp3
TU109557 other downstream 57452 1484374 ~ 1488008 (-) False nrarpa
TU109558 other downstream 57545 1483399 ~ 1487915 (-) True nrarpa
TU109556 other downstream 57545 1484374 ~ 1487915 (-) False nrarpa
TU109534 other downstream 71582 1466751 ~ 1473878 (-) False G74031
TU109952 other upstream 643180 2194115 ~ 2197311 (-) False LOC122352692
TU110254 other upstream 1786453 3337388 ~ 3339929 (-) False LOC122353137
XR_006251926.1 other upstream 2050677 3601612 ~ 3607788 (-) False hnrnpd
XR_006251921.1 other upstream 2354679 3905614 ~ 3912742 (-) False LOC122352741
XR_006251920.1 other upstream 2354679 3905614 ~ 3912742 (-) False LOC122352741

Expression Profile