RNA id: XM_043250457.1


Basic Information

Item Value
RNA id XM_043250457.1
length 2509
RNA type mRNA
GC content 0.44
exon number 4
gene id kctd7
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 12908571 ~ 12912532 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCTGTCACGTACGTATTTTGCGTACGTGATTTCCAGCGCACACGAGCAGCCTCTAAGAGCCTCACGTCCACCTGACCAGCCCACAGaccacacctctctctctctcggccgTCCTCCTGGTCGCTGACAGTCTGCGTGCGGGCCTCGATCGACGCTCGTGTCAGACCTGCTGTGGGTGTGTGCATGCAGCATAATGGAGCAGGCGAAACCCCGAACGGAGAGCCGCCTCCGCTTTCCTTTAGCGCAGCAGCTCCGCTCCAAATGGCAACATCACGGGTGAGGAGGTTCGCGCAGGAGGGGCGGACGGTCCCTCCTCAGCCGAGAGTGATGGTGGTGTTTTCGGCTGCGAGTGACAGTGAGAAAAAGGGAGATGCGATGTCGGGCGCGGACACCGGGGAAGAGGAGTATCGCAAACCAGCCATACATGTCCCTAACCTTAATCTAGGGAAGTCCCTTCGCACCTTAGACGCACCTGAGGAGTTCCCAGAGGTCATCCCCCTAAATGTAGGAGGTACATATTTCACCACTCGGCTGTCCACTCTGCGACGTTATGAGGACACAATGCTGGCCGCCATGTTTAGTGGGCGCCACCACATTCCCAGGGATGCAGAGGGACGATATTTCATCGACCGAGACGGAGCGTATTTTGGGGACATTCTGAATTTCTTGCGAGAAGGAGAGCTTCCTCAGAGGGACCGTGTTCGTGCAGTGCACAGAGAAGCTCAGTATTATGCTATTGGGCCTCTTTTGGAAAGCCTGGAAGACACGCAGCCGCTTACTGGAGAGAAAGTGCGACAGGCTTTTCTAGATCTTTTGCCCTATTATAAagAAAATCTTGAGCGCATTGTGGAAATTGCAAAACTTCGTGCCATGCAGCGGAAGGCCCGTTTTGCAAAGCTGAAGATCTGCGTGTACAAGGAGGAGATGCCCATCACCCCTTATGAAAGACCGCTGTTCAATTCGCTGCGATTTGAGCGCTCAGAGAGCGAGGCCAAGCTGTTTGAGCACCATTGTGAGGTTGACGTGTCCTTCGGGCCCTGGGAGGCAGTGGCGGATGTCTATGACCTTCTTCACTGCATAGTAAGCGACCTGGCAGAGCGCGGCATCTCTGCTGACCAGCAATGTATCGGCGTGTGCGACAAACACCTCATCAACCACTACTACTGCAAAAGGCCAATCTACGAGTTTAAAATCACCTGGTGGTGAAGGTGTGGTGTTTTAGCTGGTGTTTCGTTTGCCAAGAACTAATACGCGCAAATCTGAGCAAATGATGTTTGCTGCTGTCTACAGTTACATGAAACCAGCAGGACCATAGAGTTCTACTTGAAATGAGCGGAAATAATGAAAAGCTTTTGAATAAGATGGCTGTTATTGTGGCATTTGCTCTTTTGTTTCAAACTGCGGTTTGCAACCCCAAATTTCTTTTATGGGCAGCTCTATTGATTCCTTTAGTTTTTGTAAGTAATTGTTTAACTTAATGTTTAAGTTTGTTTAGAAAAAACCCGGAATCGTTTTGTCCAGTTGTAGTTCTTATGGGATTTTCTGGATCCATCCTCAGAGGAAGTGAACTTTTGTGAAACAGTGTTTTCTGTTCTAAATATGACATCTCTTAAGTATGTGTCTGTGTTAGATGTATTGAATGTATTAACAGTTTGATCGAAAAATCTGTCAACTGGAGCCATATTTGGAAATTGTTTGATGTATTTCTTGAGaaggaaacctttttttttccctacagtattttaaaattatttgaccAATTTGTTTCACATGAGTTATATATGCAGGACCTGATCTGTGTCATGTTGCCAATAATGAACACTTCAGATCATGCAATCTCAGAAGATACTCACTTTAACATGAATACAAAGGTCTTTCTGGTTTTTACAGCCACTCAAAGCTTCACATAAAGCCTTCTAAAATAACCAAACATCACTAGGCGAGCATAAAGGTTTTCATttatgtcaaaaaataaattgttctcAAAggagtttagattttttttagaaagatttATGAGCTAGATTAAATATGTcctgaatatgaatataaaatgagtatatttaaaatattaaaagactgTTAGCCACTTTATTGCAGGTTAGATTGCCTATTTTGCTACTTTGACACTTTATGAAGTTATTTTCTGCTGCCAAAAGCATTTGCCCATACTTTTATTTGCCATGTTCTTCAACAATAGCATATGATTTAgcattatttgttgttttagtcATCTGAAACCTTTGTCTCTCATTGTTGAGAGCTGTGAAAGCCACACAAAGTTGCATGAGCTCTCTTTGTTTTGGCAGCAGAATATCTAAACCAGTTACAATGCTTTTGATAATCCTAACTGGGATTTGTTTTCAGTCTTGCCCAGTTTACTTTAAGTTGCTCAAGTCTAAACCGATGCATATTTGTTCTCTGTTGTACATTTGGTGAATACTATTGTTTGTATTGCATTATTGCTCTTACCGTGCTGATAATAAAccatatatattttgcaattta

Function

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process
GO:0005829 cytosol cellular_component
GO:0005886 plasma membrane cellular_component

KEGG:

id description
K21917 KCTD7_14; BTB/POZ domain-containing protein KCTD7/14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114135 lncRNA downstream 27836 12796664 ~ 12880735 (-) False G77135
TU114128 lncRNA downstream 29918 12874551 ~ 12878653 (-) True G77135
TU113780 lncRNA downstream 229353 12679007 ~ 12679218 (-) False uvrag
TU113778 lncRNA downstream 229946 12678367 ~ 12678625 (-) True G76912
TU113766 lncRNA downstream 298473 12605219 ~ 12610098 (-) True G76902
TU114167 lncRNA upstream 109121 13021653 ~ 13103059 (-) True G77153
TU114171 lncRNA upstream 121209 13033741 ~ 13035585 (-) True G77157
TU114230 lncRNA upstream 298084 13210616 ~ 13210946 (-) True G77208
TU114244 lncRNA upstream 400662 13313194 ~ 13315574 (-) True G77220
TU114273 lncRNA upstream 416110 13328642 ~ 13328893 (-) True G77245
XM_043250453.1 mRNA downstream 132 12901052 ~ 12908439 (-) True rabgef1
XM_043250452.1 mRNA downstream 178 12901052 ~ 12908393 (-) False rabgef1
XM_043250454.1 mRNA downstream 179 12901052 ~ 12908392 (-) False rabgef1
XM_043250455.1 mRNA downstream 182 12901052 ~ 12908389 (-) False rabgef1
XM_043251197.1 mRNA downstream 8564 12884200 ~ 12900007 (-) True trim37
XM_043250449.1 mRNA upstream 2651 12915183 ~ 13028810 (-) False cux1a
XM_043250447.1 mRNA upstream 2651 12915183 ~ 13028810 (-) True cux1a
XM_043250451.1 mRNA upstream 2651 12915183 ~ 13028809 (-) False cux1a
XM_043250450.1 mRNA upstream 2651 12915183 ~ 13028809 (-) False cux1a
XM_043251067.1 mRNA upstream 123502 13036034 ~ 13051363 (-) True LOC122353147
TU113815 other downstream 119481 12782353 ~ 12789090 (-) True mogat2
XR_006251916.1 other downstream 1703345 11176569 ~ 11205226 (-) False LOC122352715
XR_006251934.1 other upstream 626197 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 730759 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 893587 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 1289730 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 1289730 14202262 ~ 14202837 (-) False G77440

Expression Profile