RNA id: XM_043250469.1


Basic Information

Item Value
RNA id XM_043250469.1
length 2349
RNA type mRNA
GC content 0.47
exon number 10
gene id fez1
representative False

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 12491670 ~ 12500849 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTCAGTTGCCGTACCAATGCGCAGGCTCCGTGGAGCAGGAGAGGACGGCTGCTGCTTAATGCTCAGAAAACAACACTCTGAGCCTTGACTGGCTTAGACAAGACGCCGTGGACTAGATCAGCGGCCATCACGAGACGGAGCTTGTGCGTGTGTGACGGGAATGATTGTGTCTGCTGTCGTTTCATCCTGACCGGGTTTTGCTGATGGTGGTTTCTCTCTGATTATATTGGAATAGGAGGGGCTGTTTCTACCCAGATACACACGGAGAGATTCTTCTGCAGggACCGTTGCAGCGACCGCCTCCACGTGACTGTGCGATCAAGAGGGCATCAGGATGGAGGCCCCTCTGGTGTGCCTGGATGAGGAATTCGAGGATCTGCGGCCCTGCAAGATGGAGGAGCTTGAATCTGAGCCGGACTGCCGGCCTCACAAAACCATTCCTCTGGCCCCGTTGTGCCGTGAAGAGTTCTCAGAGCTGGAGAACTTCTCAGAGATGATGAGCTTCAAGTCCATGGAGGACCTCGTCAATGAATTTGATGAAAAGCTAAACGTGTGCTTCCACAATTACAACACCAAGACAGAAGGTCTGGCACCTGTTCGCAACCAAACGCACGCCGAGGAGGATGAAGAAAGGCTTCAAGATGAAGACTGGGACGACCCCACCTCAGAAACACTGAACGGCAACCTCTCAGATCAGGAGATACATGAAAAAGAAGAGGATGAGATGAATGAGAAGAATGAGAATGCCAACTGTCTGAGTGAAGAACCTCTTATTACAGCTGATCAGGTGATTGAGGAGATAGTGGAGATGATGGAAAACTCACCAGACCCtggagagacagaggaagaggaggaggatgataTTGCAGTGTCTTCCCCTAAAAGCAGTCCTTCTCTACTGGAGGAGATCCGCATGCTGTCTCAGGCTTCCAACAACAACTGCTCCTATGAAGGTCTGAGGCTGATGCCAAGCTCGGCGTTGCTTGACATCTTGTGTCGGATGGAGGCGGCGATACGAGAGTATTCGGAGGAACTGGTGGCCCAGCTGGCCCGGAGGGACGAGCTAGAGTTTGAGAAGGAGGTGAAGAACACCTTCATCACAGCTCTGATGGAGGTTCAGAACAGACAGAAGGAGCAAAGGGAGCTGAGCAAGCGCAGGCGTAAGGACAAGGCCATGAGTCTACAAGGATCCACCCGCCCCGAGAAGACCGGGAGCATGCCTGCAAAAcGCTTCAGCATGGAGGGTCTTTCCAACATCCTGCAGACAGGCATCAGACAGACATTTGGGACCTCAGGGACAGAAAGACAGTACCTAAACACAGTCATCCCATATGAGAAAAAAGGAACTCCTCCATCTGTGGATGACTTGCAAATGCTCACAAAAATTCTTTATGCCATGAAAGAAGACAGCGAGAAGGTCCCGACCCTCCTGACTGACTATATACTAAAAGTTCTGTGTCCTACCTAAAGTCCTGAGCGTGATGTGCTGACCGGGTGAGACCGAGAAGAGGTCAGGGCTCGTCGTTCCTCCTCTCTCAGTTCTCCAGCCCAGCTGCATGAGCTCCCTTATCCAGTATCAGCGAGGGACCCTGAACATCTAACCATCCTTCTCTTGCTTATCTaatgacctttgaccttgcTCATCTCACTGCCCTTCCTGTATTCACATATCCACGAGGTTCATACCACAGCGCCTGGTGCTTTACATGTTTTCTACTACGTACGTTACTACGGGCCAAAAGCCATACGGAACGTGTAAGGGTAACAGGTGAACTATAATCAGTTTAACTCTACGATCaggtaatatttttatttttatttttaaaaatacgcCTAACATAAGGCATTTTACATACTACTCAATCATTCACATCCGTTCTGAACACGGGGGTCGATGAGAAGGGCATTATTCACAGTCTTCTTCAGGCGTAGACGCATCGAGTCGAGagcacatttgaaaataatccATCCACACTTTCTGCTTTTGCCGTTTTAGTATTGTGGCTTAATTTCAGCCAAAGTCGGTTGAAAATACAGCATGTTTTAGTGTTCTACATTAATGCCAAGTTATAGGGAAAAACCTTGtgactttttcttattttgggtaacctgagattttttttttcatcctatGTATGAATTATTCAGTTCTACATAATGTGGTTCCATTTGTCTAATTaaaacatgttgtttttttttgttttgtttttttacttttaacattaACTGTCATTCATGCCTTGTGCTTACAtctttaatgtatatatttcttatttactaAGGGACATGGAGGAATGTGAAGTATTGCTGAGTTATAATTCCAATAAATGTCGAACCCTGTGAAAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251968.1 lncRNA downstream 38019 12448542 ~ 12453651 (-) True LOC122353234
TU113584 lncRNA downstream 725460 11701871 ~ 11766210 (-) False G76755
TU113766 lncRNA upstream 104370 12605219 ~ 12610098 (-) True G76902
TU113778 lncRNA upstream 177518 12678367 ~ 12678625 (-) True G76912
TU113780 lncRNA upstream 178158 12679007 ~ 12679218 (-) False uvrag
TU114135 lncRNA upstream 295815 12796664 ~ 12880735 (-) False G77135
TU114128 lncRNA upstream 373702 12874551 ~ 12878653 (-) True G77135
XM_043250808.1 mRNA downstream 60791 12311190 ~ 12430879 (-) False robo3
XM_043250810.1 mRNA downstream 60792 12311190 ~ 12430878 (-) False robo3
XM_043250811.1 mRNA downstream 60793 12311190 ~ 12430877 (-) False robo3
XM_043250809.1 mRNA downstream 60793 12311190 ~ 12430877 (-) False robo3
XM_043250813.1 mRNA downstream 114405 12311190 ~ 12377265 (-) False robo3
XM_043250281.1 mRNA upstream 4163 12505012 ~ 12509908 (-) True vps26bl
XM_043250581.1 mRNA upstream 178141 12678990 ~ 12769416 (-) False uvrag
XM_043250579.1 mRNA upstream 178888 12679737 ~ 12769417 (-) False uvrag
XM_043250580.1 mRNA upstream 184506 12685355 ~ 12769416 (-) True uvrag
XM_043250875.1 mRNA upstream 270577 12771426 ~ 12779789 (-) True dgat2
XR_006251915.1 other downstream 1284418 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other downstream 1286443 11176569 ~ 11205227 (-) False LOC122352715
XR_006251917.1 other downstream 1286444 11176569 ~ 11205226 (-) False LOC122352715
XR_006251916.1 other downstream 1286444 11176569 ~ 11205226 (-) False LOC122352715
XR_006251914.1 other downstream 1286444 11176569 ~ 11205226 (-) False LOC122352715
TU113815 other upstream 281504 12782353 ~ 12789090 (-) True mogat2
XR_006251934.1 other upstream 1037880 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 1142442 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 1305270 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 1701413 14202262 ~ 14204127 (-) True G77440

Expression Profile