RNA id: XM_043250482.1


Basic Information

Item Value
RNA id XM_043250482.1
length 2206
RNA type mRNA
GC content 0.44
exon number 9
gene id tmem150c
representative False

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3617515 ~ 3625783 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttaaACTGGCTGAACTTAAGACTCAACACTTCCCCAATGCTAACAACATTAGCTAACTCGTTAATTCCACGGTAATGACGGAACTTTCTTTTGAGCAAAGTTTCTTTTGAGAAACGCACTCCGGATCAACTCCTTTACACGTGTGTGTTTAATGCGCTGTTGCCGTGGTGAAGTCCAAACGCTTTTCGAATCGGTTCGCGTGAATCCTCGAAAAGAACCGGTTCGAATGAACGACTCGTTCGCGAATCGGACATGACTGCTCGTGAGATCCATGGCGCACAATGTCTGTCTGAGAAATAACAGACCGAGTCCGTCGGCCCAGTTCTTGCTGTAAAGACTTCACAGAGCTCTTCTTCCTCGGTGAAGCCAAACCCGTTCACCGGCTCTCTAACACAACCCAATGCGAACGATGTCTGTCTCGCAGACCCAATGAAATGAAGAAGACACGGGCTTTACACGCGACAGAAGAGTGTGCTGTCTACAAGACTGAACCCTGTCCACACGTAAGACATTCTCCAAGACATCTTGAGGCTGGGTTGTTTTATCGACGTTCATAAGGAGACATGAGGAAGTGCAGTCCATGGATGTTTCTGcctgtaatgttttctttcttcacaGCTGCTGGTCTCTGGGTTGTGTATTTCATTGCTGTGGAGGATGAGAAAATCACTCCGCTCAGTTCAGAGTACAACATTGCAGGCAATGCCCCACCTGCCAGCTGTGTGTTCAGTCAAGTCATGAACATGGCAGCCTTTGTAGGCTTCATTCTGGGAGTGCTGCGATATCTGCAGCTGAAGCCCAGAGTACATAAACCCTGGCTCAACATCGGCAGTCTGGTGGCTTTGTCTCTTGCCTGCTTTGGTATGACTTTAGTAGGGAATTTCcagCTGTCCAACGATGAAGAGCTGCATAATATTGGCACGTCCATGACCTTTGGTCTAGGAACTCTGTTCTGTTGGGTCCAGTCTTTCATGACCCTAAAGGTCAACCTGAGGAATGAAGGCAGGCGAGCAGGAATCCCTCGCTTTCTGTTGTCCGGAGCTGTAACTTCCTGCATGTTGCTTTACTTCGCTCTGATGGCTCAGCGGCTGCACATGCACGCGGCACGAGCTCAGTGGGCACTGGTCATGTTCTTCCTAACGTACCTGGGCACGTTCGCCATCGAGTTTCGGCACTACCACTTCGAGATCGTCTGCAGCGACGACCAGGACCCTCCACTCAGCCTCTCCGAGAGCTTCTCTGAGGTCTCCGAGTACCAGTCTGACCAGCTCTAGTCTCACTCTTCAGTACACGTGGACCCTCGTACTTCAGTGTTCGCCAGTGATCAGTCCTGCATGTAAACTGAATGTAATCTCTCTAGAACGACCTTCGGACGAGTACGTCTTCTGAATGTGTAGATAGGCTTTTTCGCAAAAGCGTCAGATTCGCAAAATGCACAACAATTTACTGTGTGACGTGTTCCATGTTCGTGTGTCAGATGAGCGAAGCAACGAGGACACTTCCGAGAAGAAAATCTAAATACGGGAAGTATTTTGGCAAGATAATCCTTTGGAAACGTTCTGTTGTTATTTACTAATCCTTTTGGTCAGTTTAAATCTGTATGCTGTTCATTTTTGTGGAAGATGTATGAGCTTCTGAAAAATCTTTACATGGGATAAGGGTTTAGAAACTTAATTTAAAGgggcagttcacccaaaaataaacattttgtcatttactcaacctcaagtGTTCCGAACCTATAGTTTCTATCTTTCCTTGAACATAAATAAAGCTATTTTGATTAAACTATTCTGTAAGgaaacagttgctggtagccattgactaccatagtatgaaaaaacaaaaatagaatgGCTATCCTCAACATTCTTTAAactatcctcctttgtgttcaacGGATCATACAGGTTTTTTAACAACTTGAGACCGAGTAAATGTTATTTGAACTATATTTTTGTTCTCATTGAATTATACATGTTTTGTATTCATGTAACCGCATTACATTTTGAGCCTGTTCTGCATAATCTTACAAGAAGCTTATGCAGCTTTTTATACTCGATGTTGAATATCGTAAACCATCTCTGACATTGATAATCCCATATTTTGTTACTAAAACAGACATCTGTTATTGGATGCCGGTCTAAATGTTGCAAGTGTGATTTGTTCGATGTATCCGTTTGGAATAAAATTTTACAACAACGTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110304 lncRNA downstream 29621 3587435 ~ 3587894 (-) True G74551
TU110262 lncRNA downstream 83799 3309787 ~ 3533716 (-) True G74533
TU110268 lncRNA downstream 162521 3450537 ~ 3454994 (-) True G74537
TU110147 lncRNA downstream 567997 3049232 ~ 3049518 (-) True G74459
TU110143 lncRNA downstream 727567 2889445 ~ 2889948 (-) True G74455
TU110345 lncRNA upstream 73822 3699605 ~ 3700769 (-) True G74574
TU110414 lncRNA upstream 154276 3780059 ~ 3834370 (-) True G74614
TU110406 lncRNA upstream 195608 3821391 ~ 3824596 (-) True G74609
TU110425 lncRNA upstream 201342 3827125 ~ 3828028 (-) True G74624
TU110415 lncRNA upstream 205819 3831602 ~ 3832092 (-) True G74615
XM_043250476.1 mRNA downstream 5232 3607967 ~ 3612283 (-) False hnrnpdl
XM_043250477.1 mRNA downstream 5232 3607967 ~ 3612283 (-) False hnrnpdl
XM_043250475.1 mRNA downstream 5232 3607967 ~ 3612283 (-) True hnrnpdl
XM_043250472.1 mRNA downstream 9727 3601612 ~ 3607788 (-) False hnrnpd
XM_043250282.1 mRNA upstream 18286 3644069 ~ 3663881 (-) True sec31a
XM_043250199.1 mRNA upstream 217909 3843692 ~ 3879520 (-) True pam
XM_043250200.1 mRNA upstream 217909 3843692 ~ 3876554 (-) False pam
XM_043250198.1 mRNA upstream 217909 3843692 ~ 3876554 (-) False pam
XM_043250920.1 mRNA upstream 265859 3891642 ~ 3904123 (-) True pdzph1
XR_006251926.1 other downstream 9727 3601612 ~ 3607788 (-) False hnrnpd
TU110254 other downstream 277586 3337388 ~ 3339929 (-) False LOC122353137
TU109952 other downstream 1420204 2194115 ~ 2197311 (-) False LOC122352692
TU109557 other downstream 2129507 1484374 ~ 1488008 (-) False nrarpa
TU109556 other downstream 2129600 1484374 ~ 1487915 (-) False nrarpa
XR_006251921.1 other upstream 279831 3905614 ~ 3912742 (-) False LOC122352741
XR_006251920.1 other upstream 279831 3905614 ~ 3912742 (-) False LOC122352741
TU111527 other upstream 2912751 6538534 ~ 6540926 (-) False si:ch211-113d22.2
TU111553 other upstream 3002642 6628425 ~ 6631157 (-) False sprn2
TU111552 other upstream 3002647 6628430 ~ 6631157 (-) False sprn2

Expression Profile