RNA id: XM_043250548.1


Basic Information

Item Value
RNA id XM_043250548.1
length 2159
RNA type mRNA
GC content 0.45
exon number 6
gene id mfsd13al
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14541530 ~ 14546151 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGGTGCAGTGCACTGTTTTTAAGTGGAATGAGCTGTCGTTATGATCTTTTTTAttgaaagcttttattttcttgcaaCACTCTCTGAGATGATCCGGAGAGTAAACTAATTAGCCGCGGTTGCATGAGCTTTATTATAGTGTTAAGTTTAAGTCCTTTGCGGACAGTCTTTAGCTTCCAGCCAGTCACATATTCGTCTTAGCATCATGAGGCACTTTGCTCATCCAGCTGCTCTGGCTTACTCCATGACAACGCTCGGTGctggcatgatgaacagcatttTTAGTTTCTATTATGTAAAGCTATTcttaaataagtacaaaatatCAGAGACAGCCTTCCATCAGTCGCAGGTGGTCTTTATGATCTGGAATGCTCTGAATGACCCCTTGTTTGGATATTTTCAAGACAACTCTCGTATGGAGTGCTGCTCGCGCCGGAGGCTCTCTATTTTATACGGCGCCCCACTGTACTGTCTGTCTTTTCTGCTGGCGTGGTTCCCGTGGAGGACGTACGAGGCGGACGACTGGATGAGCGGCGTCCACCTCATGGTGACCCTCTGCGCTTTCGACGGCATGCTCACATTCGTGCTGCTAGCCCAGTGCGCCCTCTTCGCAGAAATCTCCGGGCATCATCAGAACAGACTGAGGCTGATTAAATACAGCCAGGTGGCGTCTCTGATGGGCTCCTCCAGTGTGCTCTTCTGTGGTCTCGTCTCCGAAAACATGGAAAATTTTCCCGCCTTCCAGGGATTCAGCGTGGTGGTGGCCATACTGGCCTGCGTTTGCATGCTGTACACGGGCTTGAACAGCGAGAGTCGAGTTGACAGCAGAGCCTCTGAAGAAGACTCCCAGAGTCCTCAGAAGCCGCCGCTCTCGCTGTCGTCCGTGATGTCCATGACCTGGCAGATCATCACCAACCGAGACTTCCAGCTGTTCGTGATCATGAACTTCTTCCAGGTCTTCATGGTGGCCTTCTGCAATAACTTCACCATGATTTTTGCAGAGCACCTCATTCCTCCGGATGTCCTGCCATCGCTTGCCAAGAGCGTCATGTATGGAGCTGGATTCATCTGCCCTCAGATGTTGGTTTTGTGCAGCCAGAATCTGCTCCATAAGTTTGGCTACTACAGACTCATTCTGATCACCTTCTACGTGGAGGCCGGAGCTGCTGTGATCATGTTACTGCTGGGTCCAGGCAACTACTATTTCCTTGCATTGTTCCTCACTTCCAACATGGTCTTGGTTCAGGCGGCCTTCAGTCTCTTCAATTTGCCTCTAGCTGACATCATTGACTCTGACCTGCAGAAATACAAACGCAGCTCTCCTCTCTCGTCTATGGTTTTTGGGACCAACGCTCTTTTTACAAAGCCGGCACAGTCTTTAGCTCCTATGCTGGTCGTTTCCGTTCTAAACCAATATGGCTACGCAGAAATGAAGGACGCTGAGAAGGCTGCAGATCCAAGTGCCCTTCAGTCTCTGCACAGTACCATGTTTTACCTGGTGTGCGTGGTGCCGCTGTGTGTCTCAGTCCTGCAGGTGTTCGCCTGGAGGCCGTTCTCCATCAGGGAGAGCCACACAATAGACTCAAAGTACATCGATGGGTGAAGCCGGCTCATTTCACTTTGTTTGTATGCGTTCACTTTCAGCActtgatttatattttgatttttgttaaCTACAGACGTGAGAAAGGGAATTTTCTAGATGAATCTCTTGGTACTGTAAAGCAGGTTTGTTTCTCAGGTGGTAGTTGGTTCTCTATATGTACTGTATCTCATCACACAAATCAGATACATTATCTGAAATATAGGAAAATTATATGTATGCAGAGGAAATGTACAGTCAGCCAGTCCTATTTTTAAAGTTAGTTTGAGtgtaaattatttgattatgtGTGAGGAAAGAGAGCGTGGAGTGGAATTGTTGTggttgaccaatcagaatcaagtaatTCAAAGAGTTGTGTAATAAGCTTCTTTTCTGTGACACAATCTCAAAGCTTTGgagtcataatttttttttatcacttcaCCTTTGATGATTGATtcacacaaaacattaattttgaatatatttatttgtttattggttaTTGGGAAAGGTTTTGTGATTGTTGCTATTTTTCTACGTCAATAAACTTAACTATGTGGTCAAATAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114679 lncRNA downstream 44076 14495498 ~ 14497454 (-) True G77514
XR_006251945.1 lncRNA downstream 76210 14460368 ~ 14465320 (-) True LOC122353010
TU114626 lncRNA downstream 116043 14424513 ~ 14425487 (-) True G77480
TU114621 lncRNA downstream 172975 14366281 ~ 14368555 (-) True G77476
TU114604 lncRNA downstream 179796 14361354 ~ 14361734 (-) True G77472
TU114743 lncRNA upstream 42255 14588406 ~ 14589880 (-) False vwa3a
TU114876 lncRNA upstream 555998 15102149 ~ 15103569 (-) True G77669
TU114879 lncRNA upstream 592456 15138607 ~ 15139007 (-) True G77672
TU114881 lncRNA upstream 610198 15156349 ~ 15156591 (-) True G77674
TU114883 lncRNA upstream 613314 15159465 ~ 15159847 (-) True G77676
XM_043250726.1 mRNA downstream 692 14532487 ~ 14540838 (-) True si:ch211-165g14.1
XM_043250843.1 mRNA downstream 52996 14485329 ~ 14488534 (-) False dhrs7ca
XM_043250842.1 mRNA downstream 52996 14485329 ~ 14488534 (-) True dhrs7ca
XM_043249856.1 mRNA downstream 56238 14484799 ~ 14485292 (-) True im:6904045
XM_043250845.1 mRNA downstream 60081 14475189 ~ 14481449 (-) False LOC122353009
XM_043250044.1 mRNA upstream 8846 14554997 ~ 14568193 (-) False sdr42e2
XM_043250043.1 mRNA upstream 8847 14554998 ~ 14568189 (-) True sdr42e2
XM_043250015.1 mRNA upstream 22179 14568330 ~ 14589895 (-) False vwa3a
XM_043250016.1 mRNA upstream 22179 14568330 ~ 14589895 (-) True vwa3a
XM_043250050.1 mRNA upstream 44868 14591019 ~ 14611223 (-) True mosmoa
TU114673 other downstream 56260 14484817 ~ 14485270 (-) False im:6904045
XR_006251944.1 other downstream 60081 14467186 ~ 14481449 (-) False LOC122353009
TU114670 other downstream 60093 14474120 ~ 14481437 (-) True LOC122353009
TU114597 other downstream 198518 14340046 ~ 14343012 (-) True G77465
TU114559 other downstream 277208 14234506 ~ 14264322 (-) True G77443
XR_006251888.1 other upstream 23210 14569361 ~ 14589899 (-) False vwa3a
TU114878 other upstream 560986 15107137 ~ 15107752 (-) True G77671
XR_006251922.1 other upstream 683818 15229969 ~ 15289672 (-) False LOC122352744
TU114910 other upstream 811534 15357685 ~ 15358232 (-) True G77702
TU115089 other upstream 1347532 15893683 ~ 15897098 (-) False npffr1l1

Expression Profile