RNA id: XM_043250779.1


Basic Information

Item Value
RNA id XM_043250779.1
length 1663
RNA type mRNA
GC content 0.41
exon number 6
gene id bcl7ba
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13052114 ~ 13055376 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGCGATGCGAGATTAGCGGAGCCAGACTGCGAGACCGACACGATTCCAGTAAGAGTACTGATAAAATTCAGAAATGTCGGGTCGCTCGGTCCGCGCGGAGACCCGAAGCCGCGCTAAAGATGACATTAAGAAAGTGATGGCGGCTATCGAGAGAGTACGGAGATGGGAGAAGAAATGGGTCACAGTTGGAGATACATcattaagaatatttaaatggGTTCCTGTGGTGGACACAAAAGAGAAGGACAAAAGCAAAGTGTCTGTGGGTGGAGAGACACAACGGAAGAATTTTCCCGCAGAGGAGTCATCTGATAACTCCTGTTCTGTACTCTTAGATTTTCAAGATGAGAACAGCAACCAGAGTTCTCTGTCTGACTCGTACCAGCATAAAGTAGCTGCAGACAGCAGCAATAACTCCAGTCCACAGCCCAGTGAGCCAGTCAGCCCTGTTCCTCAGAGTCTAGACTACCGTACAGATGACCCACAGCCGCCCACCCTCGGCCAAGAAATCATGGAAGagccATTGCTGCAGTCAAGTGAGATAGCAGATGAACCGCCAACACTGATCAAAGAAGATCTTTTACCCCTCACTGCTCAGGAGGATGAGGACAGTTGTGGAGCCCCACCACTGAAAAGAATCTGCACCGAGCAGGTCTCGGTCATCCAGACGGCCCCTCTtagctaacacacacacgcacacaaacacacacacacacacacgcacacacgcactcacaatGTACACTGGGCATTGATAATCAGCCAGACTGATCACTGACCTTCATAGAACTGCTGCAAAAGACACAGTATGGACCAGACATCAATAAAGCACTATATTTATTATCACATGGGATTGCTTTGCAACATTTTAGATTTACAGATCCTTGCTTTCCCTTCATATCTCCTACAAAATGCTTCCATTCAGGTCATGTCAGGATTTTTGAAGATTTTAGTAGAGTCTCTGAATTTCTTACATCCTACACAAATTCTGACATAACATGATTGATGCATTAATTCAACGTTCATAggccaaaaccaaaaaaaagccaGACTATTGACTAGACATTCCTGTTTACAGggagaatgaatgaatgtactATCTCTATAAAGCCCTTTTTGTTGAAATTGCTGTTACGGTTATTATAATgctaatagttttattttattgtcattagaATGTGATCCttgttaaaaaagaaagccataATCTAATTTCATGTTGACTGAAGGCTTAGTCATTATTGAAGAAAATGTCCTCCAAAACAAATAACGAATTAAATGATAAGGGTACTTGAAATATAATTGAACACATCACGCTTCATGCAAAGATAAGCTCATCACACCATTcccttttaataaaaacaatggcTCAACATGCAGAATGTCTGCAATCAAATTCTGAAAGTTTACACTTATATAATATGATATCTATATTTTCTGCTTGTGGATTCTGGTCTCAGGGTCTGTAGTACCTCCAACTCTCATTTGTTTGCAGTAATTGAACATTTCTCTTTTGTCTCTGTTGGACACCCATAAAAATCTTGTCTCTTATGCcaccttttattttttgcacactGGTCTAGTGGGCACATTGAAGTTGATGAAGCAGTCGCATTGTTATTTGATGCAAATATCATTAAAGTTTTAGACATTTCAAGATCA

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114171 lncRNA downstream 16529 13033741 ~ 13035585 (-) True G77157
TU114135 lncRNA downstream 171379 12796664 ~ 12880735 (-) False G77135
TU114128 lncRNA downstream 173461 12874551 ~ 12878653 (-) True G77135
TU113780 lncRNA downstream 372896 12679007 ~ 12679218 (-) False uvrag
TU113778 lncRNA downstream 373489 12678367 ~ 12678625 (-) True G76912
TU114230 lncRNA upstream 155240 13210616 ~ 13210946 (-) True G77208
TU114244 lncRNA upstream 257818 13313194 ~ 13315574 (-) True G77220
TU114273 lncRNA upstream 273266 13328642 ~ 13328893 (-) True G77245
TU114322 lncRNA upstream 430891 13486267 ~ 13488833 (-) True G77284
TU114305 lncRNA upstream 445427 13500803 ~ 13505849 (-) False dclk1a
XM_043251067.1 mRNA downstream 751 13036034 ~ 13051363 (-) True LOC122353147
XM_043250449.1 mRNA downstream 23304 12915183 ~ 13028810 (-) False cux1a
XM_043250447.1 mRNA downstream 23304 12915183 ~ 13028810 (-) True cux1a
XM_043250451.1 mRNA downstream 23305 12915183 ~ 13028809 (-) False cux1a
XM_043250450.1 mRNA downstream 23305 12915183 ~ 13028809 (-) False cux1a
XM_043250777.1 mRNA upstream 695 13056071 ~ 13060135 (-) True tbl2
XM_043249939.1 mRNA upstream 5336 13060712 ~ 13070717 (-) False prdm15
XM_043249938.1 mRNA upstream 5336 13060712 ~ 13070717 (-) False prdm15
XM_043249936.1 mRNA upstream 5336 13060712 ~ 13070717 (-) True prdm15
XM_043250738.1 mRNA upstream 16015 13071391 ~ 13084252 (-) True LOC122352956
TU113815 other downstream 263024 12782353 ~ 12789090 (-) True mogat2
XR_006251916.1 other downstream 1846888 11176569 ~ 11205226 (-) False LOC122352715
XR_006251934.1 other upstream 483353 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 587915 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 750743 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 1146886 14202262 ~ 14204127 (-) True G77440
TU114555 other upstream 1146886 14202262 ~ 14202837 (-) False G77440

Expression Profile