RNA id: XM_043250913.1


Basic Information

Item Value
RNA id XM_043250913.1
length 3087
RNA type mRNA
GC content 0.49
exon number 10
gene id slc27a6
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 210872 ~ 226209 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACAGACTAAACTGGATAAACAGGGCCGAGCGCGTGGCTCTGGCGACACGCCCACCGACCAGGGCGGTTGTACAACAAGAGTCACGTGACGCGCGGAGCGTTGCATAAATTAAGATGACAGTAGCGTTTTATAACATCCGCGAATTAAGCCAGTGACATTAAGATGTCAGAGCGCTTTAGAGAGTTTTAATCGGGCTAATCGGTCAGAGATGTGGTCGTGGGTCGCGGCGCTGCTGGCGGGGCTCCTCTCCGCGCTCCTCGCGCAGCGCCGGTGCTTCCCGTACTTCTGGAGAGACGCGCTGTTCCTGACGAGAGTCCTGAGATACGGAGCTCGTCTGGAGATCTACAAGCGGAGCGGGCGGGTCGTGACGGTCGTGGACAGGTTCGTTCAGCAAGCCCGGCGGATTCCCGACAAACCCTTCCTGATCTGTGAAGGACAGACGCTCAGCTACGGAGAGCTCGAGGAGCGCAGCAACAGAGTCGCGCGGGTCTTCCAGAGCGCGGTGGAGAGCGGAGACACCGTGGCGCTCCTCATGAGCAACGAGCCCGACTTCATCTCCGTCTGGTTCGGCTTCTGCAAGCTGGGCTGCGCCGTGGCTTTCCTCAACACCAACATCAGGTCCAGATCCCTGCTGCACTGCTTCAGCTGCTGCGGAGCCAGACTGCTGCTGGTGGGAGCCGGTGTTGTTCTAGATCTCCTGGAGGCTGTAGAGGACATTCTTCCAAGTCTTCAGGAGGACGGGATCAGGGTTTGGAGCATGACCCGAGAGAGTCCTCGGCCCGGAGTCTACAGTCTGCTGGAGAAGATGGAGAGGGCCCCTCCGGAGCCGGTCCCTGCCGAGCGCCGCTCCATCCGCTGCCTTCGAACCCCAACGCTCTACATCTTCACCTCAGGAACCACCGGGCTGCCCAAAGCTGCGGTCATCACTCATCTGCAGGCGCTGAAGGCAGCAGGAGGCTTCTGGGCGTATGGAgccacaggaagtgatgtcatctACACGCCGCTTCCCCTGTATCACAGCGCTGCCTCGCTCGTGGGCATCGGAGGCACCATTGAACTGGGTGCCACCTGTGTCCTCAAGAAGAAGTTCTCTGCCTCTCAGTTTTGGCATGACTGCAGGAAACACAACGTCACTATATTCCAGTATATAGGAGAGCTGTGCCGATATCTGTGCAATCAGCCCACGGCAGAGAATGAAAAGGATCACAGGGTGCGTATGGGAGTTGGGAACGGCCTCCGGCAGGACGTATGGAGAGAGTTCCTCCGGCGTTTCGGGAATATCCGCATGTGTGAGATCTACGGCTCCACTGAAGGAAACCTGTGCTTCATGAATCACCTCGGCAAGATCGGCGCTGTCGGACGCTCCAACTTCTTCTACAAGCTGATTTTTAAGTATGATCTGGTGAAGTATGACCTGGTCAGAGAGGAGCCTGTGAGAAACAGCAGTGGATTCTGCCAGCATGTTCAGAAAGGTGAGACGGGTCTGCTGCTGTCTAAGATCTGCAGTCAGAGCCCATTCTTTGGTTACGCTGGCAGCAAACAACTGACAGAAAAGAAGATCCTGAGGGACGTGTTTGTTAAAGGAGACTCTTACTTCAACACCGGAGACCTGATGGCTGAGGATGAGGACGACTTCATCTGCTTCAGAGACCGAGTGGGAGATACTTTCAGATGGAAGGGGGAAAACGTGGCGACCACTGAGGTGACAGAGATCCTGGGACTGGTAGATTTTATTCAGGAAGCCAATGTGTATGGAGTCCAGGTGCCAGGAAACGAGGGTCGAGCCGGAATGGCTGCAGTGATCGTGAGACCTGAGCACACATTCgatgggaagaaactgttcgaTCACGTCCTCAAGGAACTGCCTTCATATGCTCGACCCCTCTTCATCAGACTGCAGGAGTCTCTGGAGATGACCAGCACCTTCAAGCAGCAGAAGTTTGCTTTAGTGGAGAGCGGCTTCGACCCCTGCGGCATCACAGACCCGCTTTACTGTCTGGATTACAGCGAGAAGAGCTACCTGCCCCTGACCAGCGGCGTCTACGATAGCATTATGAGCGGTCAGAGGAAGGTCTAGCCCTAGAGAAGTGATTGACCAGCAGACGATGAGCGACACTCTCTGTAGAGCTGTATATCTGATCAGAGTCTGCCCTGAATTATTGATCACGAGCTGCAGACCGTGTCATTTAGTGAATATAGAATTAGTGCATATTAAAGAAGGTCATGCTGATATGCTCCGAGTGGAGATGAGCTGAGATCAACATTGCCGTCTGGGAAATACTAGtgattgtaaaactgaaatcaATGTTTGTGCCCTATGAAGTAAACACTCTCAGACTTTAATGCGTGTCCTGTGTGTACATCAGTGCTTCGACCCCAGAAAAAGTTTAGTCTTCAAAGGAATATTCAAGTAATTCCTGCTGATTCATGAAGCCATCATTGATCTGACGACACAGCTATTAtgtattttggatcattttaatCGATATCATAAAACCGTCCATCTTTTGTATATGTTGCAGTGAAATATTAGAATTGTAATGCAAATACACATGCACTTTGAATCTTTCAAATACTGAAGTCTGGCTGTGACTGTTCAGTTCTAAACATCATAGAAAGTGAAGACTGTACTCTTGTCTAATCAGGGCTCTTGTAACGTTTGACATTCACTGTGAATTGTATTTGAAACTTCACTTTTTCAAATATTCTATGCAATGTTGTTAAtcaggtttagtttttttgtttgttttttataaccTAATTATGTAATAacaattttgtttacatacattGAAGTTTTCACACTGTCTGAAATGTGAGAAAGACAGCTCAGTTGTGCACTGATTCAAGAGAACAGTAAGAGAACATGAACGTGCTACCTCCTCAACAGATGCTGTGACACAAACTAAATGTCCTTGTTTCAGCAGCGGTATATATCATCATCTATAACCCTGTTATACGAGTTGTTTTATAATGTCATGACACTAAAGGTAAAAGCCATATCAGGATTATACGGTCTGTAACTATAACATGCACTGTATGTTTGCTAGcacatcataataaaaataataatgaattatacatgca

Function

GO: NA

KEGG:

id description
K08749 SLC27A6, FATP6; solute carrier family 27 (fatty acid transporter), member 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108676 lncRNA downstream 142399 53936 ~ 68473 (-) True G73453
XR_006251884.1 lncRNA upstream 39281 265490 ~ 266417 (-) True LOC122352556
TU108765 lncRNA upstream 39282 265491 ~ 266409 (-) False LOC122352556
TU108769 lncRNA upstream 58800 285009 ~ 285222 (-) True G73515
TU108763 lncRNA upstream 64957 291166 ~ 292261 (-) True G73510
TU108783 lncRNA upstream 103068 329277 ~ 329901 (-) True G73518
XM_043250885.1 mRNA downstream 525 204696 ~ 210347 (-) False isoc1
XM_043250887.1 mRNA downstream 525 205991 ~ 210347 (-) False isoc1
XM_043250886.1 mRNA downstream 525 205991 ~ 210347 (-) True isoc1
XM_043250888.1 mRNA downstream 8164 197792 ~ 202708 (-) True LOC122353055
XM_043250954.1 mRNA downstream 119551 87741 ~ 91321 (-) True LOC122353100
XM_043250437.1 mRNA upstream 66983 293192 ~ 332004 (-) False slc12a2
XM_043250435.1 mRNA upstream 66983 293192 ~ 332004 (-) True slc12a2
XM_043249954.1 mRNA upstream 116580 342789 ~ 348073 (-) True LOC122352523
XM_043250321.1 mRNA upstream 123205 349414 ~ 358819 (-) False prrc1
XM_043250320.1 mRNA upstream 123205 349414 ~ 358819 (-) True prrc1
TU108681 other downstream 119576 40690 ~ 91296 (-) False LOC122353100
XR_006251919.1 other upstream 137468 363677 ~ 396619 (-) False megf10
TU109011 other upstream 467239 693448 ~ 695778 (-) False G73662
TU109012 other upstream 467239 693448 ~ 766346 (-) False G73662
TU109014 other upstream 467239 693448 ~ 695778 (-) True G73662
TU109045 other upstream 563214 789423 ~ 793724 (-) True G73687

Expression Profile