RNA id: XM_043251065.1


Basic Information

Item Value
RNA id XM_043251065.1
length 4699
RNA type mRNA
GC content 0.50
exon number 26
gene id ints2
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10873812 ~ 10891764 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttttgagaCGCAGTCAAGAGTGCAGCATGAACACCGAAGGCAGATGAGCGCTTGTGCTAAAACAATTCACTATTCTACTTTTTAGCTTGCTGTCAGTAAGCAGTTTGGAGctctagCAGCTAGCCTATTAGCTTACCGGCGAACTCCACTGTCTTAACCGACGGCGTTCAACTTCCTGTAGGCGTAAGCATCACGAAAGACCGCGGTCTTGCGGGCCTCATCGGGGCTTGTGTTTCTGCTGCAGTCATCGGCTCTGGTAAACTTAAGAATGGCAGACAGTGCCAGTCTTCAGTTTGTGAGCCCATATGCATTTGAAGCCATGCAGAAGGTAGATGTGGCCAGACTAGCAGCTTTAAGTGACCCAGAGCTGCGGCTCCTGCTGCCCTGTCTGGTGAGGATGGCTCTGTGTGCCCCTGCGGATCAGAGTAATGCCTGGGCACAGGACAAGAAGCTCATCCTGCGACTTCTGTCAGGGGTGGAGGCTGTAAACTCCATCGTTGCACTGCTGTCTGTGGATTTCCATGCTCTGGAGCAGGACGCTAGAAAAGAGCAGCAGCTGAGGCATAAGGCTGGTGGCTCTAATGGCGAGAGCATCCTGGTCTCTCAGTTGCAGCATGGTTTGACTCTGGAATTTGAACACAGTGATCCTCTCAGGAGACTCAGACTGGCCCTTAGTGAGCTGCTGGCCATTATGAACAAGGTGGCTGACTCTAATGGAGAGTTTTTCCTCAAGTCCTCGGAGTTGTTTGAGAGTCCCGTCTACTTGGAGGAAGTGGCCGATGTTCTTTGCATTCTACAAGCAGAGCTGCCTTCTTTGATGCCCATCATTGAGGTTGCCGAGGCCCTGCTTCATGTGCGGAACGGAGAGTGGTTCCTGTGCCTGCTGGTGGCAAATGTCCCAGACAGCTTCAGTGAGGTGTGCAGGGGATTGATAAAGAACGGAGAACGGCAGGATGAAGAGAGCGTGGGTGGGCGACGCAGGACAGAAGCTCTCCGGCAGCTGTGTCAGATGAACCCTTCTCAGGCTCTGAACATCAGGGCCATGGTGGTGGAGGAGTGTCATCTTCCAGGTTTGGGCGTTGCTCTAACACTGGACTATAAACCAGACATGGCAGATGAGGCTGTCAGTCCTCTTGTGTCTTATGTCAGCGGCCTACTTCTGGGCACCAATGGAAAAGTGCGTACCTGGTTCAGTATGTTCATTCGCAACGGTCAGCAGaggaaaagagagagcagCTCAGTGCTGTGGCAGATGCGGAGGCAGCTGCTGTTGGAGCTGGTGGCCATCTTACCCCGTTCCCGCAGTACCCATGTTCCCAATGACAGCGACATGGACTCAGAGAGCAGCTCGGGGTACTCTGGCCTGAGGGAGGAGCATGTAGTGAAGGCCAGCGCGCTGCTGCGACTCTATTGCGCACTTATGGGGATTGCCGGTCTTAGGCCCACAGATGAAGAGGCGGAGCAACTGTTGCAGTTGATGACCAGTCGTCCACCAGCCACACCTGCAGGAGTACGCTTTGTCTCCCTGTCCTTCTGCAAACTGCTGGCGTTCCCTACCCTTGTCAGTACTCCAGAACAGGAGCAACTGATGGTAATGTGGCTCAGCTGGATGATAAAAGAGGAGGAGTATTTTGAGAGTGCCGCCGGTGTCTCTGCCTCTTTTGGAGAGATGCTATTACTGGTTGCAATGTATTTCCATAGCAACCAGCTCAGCGCTATCATCGAATTGGTTTGCTCCACTCTTGGGATGAAGATCGCCATCAAACCCAGCTCACTGAGCAAAATGAAGACCATTTTCACTCAGGAAATCTTCACCGAACAGGTGGTCACAGCACATGCCGTGCGAGTGGCCGTTACTAATAACCTCAGTGCCAACATCACAGGATTCCTTCCCATCCACTGCATATACCAGCTCCTGAGGAGCAGAGCCTTCACCAAACACAAAGTGTCCATAAAGGACTGGATCTTCAGACAGCTGTGCGAGACGACTACCCCACTCCACACTCAGCTGCTTCCATTAATTGATGTTTACATTAACTCCATCCTGACCCCTGCTTCCAAGACCAACCCTGAGGCTACCAACCAGCCAATCACGGAGCAGGAGATCCTTAATGTTTTCCAGGGCTTGGCAGGGGGAGATGGAGGGAAAGTCCGTTCTCAGTACACCATCACCACCCAGTTGCTCATTCTCTATTACATCCTGTCGTACGAGGAAGCTCTGCTCGCGAATACAAAGACATTGGCACTTATGCAGAAGAAACCAAAATCATACTCTCCTGCCCTCATGGACCAGATTCCCATTAAACACCTCATCCGCCAGGCCCAAGGACTGCAGCAGGAGCTGGGAGgTTTACATTCTGCTCTTCTGCGTCTTCTGGCCACAAACTATCCTCATCTTTGTATGGTGGAGGACTGGATCGGTGAAGAGGAAGTGACCGGTACTCTGCCTTTACTGAGGAAGATGTTGCTGACATCCTCATCCTGCAAATACTCACAGACACAGCTACGAGAGGctTTCCAGAATGTTCTCTCTGGCGGGCCCAGACTGCTGCGTATCCTAGAGCACCTGACGCTGCTCTCTGCAGGAGATCTGATACCATATGCAGAGGCTTTGACTGCCAGCATGGGGCTGCTCTTAGAGGACGGCGTCTCTCGCAGGATCCTGCAGACTGTTAACAAACTCTGGATGGTACTTAATACAGTCATGCCACGCAAGCTGTGGGTGATGACGGTAAACGCTCTGCAGCCTTCAGTAAAGCTCCTGCGGCAGCAGAAATACACTCAGAATGATCTGATGGTGGATCCTCTCATCGTCTTGCGCTGCGACTCTAGAGTCTTCAGGTGTCCTCCACTAATGGACATCACTCTTCATATGCTGAATGGGTACCTGTTGGCATCTAAAGCCTACTTGAACGCCCACCTGAAAGAGACGGCTGAATTTGAGCGACAAGCTCAGACTGTATCAAACCTTGGGCTGAGCGGCCAAACTGATACTCCTGAGGTCACCAGAGAAGAGCTGAAGAACGCTCTGCTGGCTGCTCAGGACAGTGCAGCGGTACAGATCTTGCTGGAGGTGTGTTTGCCGTCCCCTCAGGAGGAGCTGCAGCtgggaggaggtggaggagcaGACAGCCTGTTGAGGAGCGTTCAGTCCGCTCCAGGTATTCCCACGCGGAAGCAGGTGGGCGACGCTGGGGCCGGGCGGGGGGCCCAGGGGGAGCGCGAGGCAGAGGGCGGGCTGCTCAGTGACCTGAGGGAGGTGCAGTGTCTCATCTGCTGCCTGCTGCACCAAATGTTCATCGCAGACCCCAACATTGCCAAACTAGTACACTTTCAGGGTTATCCGCAGGCTTTGCTCCCTCTGACGGTGGCAGGAATACCTTCCATGCACATCTGTCTAGACTTTATCCCAGAACTCCTCGCTCAGCCGCAACTGGAGAAACAAATCTTCGCCATACAGCTGTTGTCCCATCTGTGCACCCAGTACGCCCTGCCCAAATCCCTCAGTGTGGCACGTCTTGCCATTAGTGTGATGGGCACCCTCCTCACAGTGCTGACTCGTGCCAAGCGCTTTGCATTTTTCATGCCGACGCTGCCATGCCTGGTTTCATTCTGCAAGGCTTTCCCTCCACTCTTTGATGATGTCATGTCCCTCCTGGTTCAGGTAGGACAGGTGTCTGCAGCTGATGTCACCACCAAGGCCAGGGATATTGACCCTCTCATTGCCAGGCTCCAGTATCTGAGACAGAAGCCACAGGAAATACTGCTGTCGGAATCCAAGTACTCTCTACACAAGAGGTCTGCAGAGGAACTGGGCGGAGCCGATCCAGATGTTCAGCTGTGCTATCAGATAGAGGCCACCTTCATGGATATCATCAGCTCCAGTACACAGGCACTGTGACAACACTAACAGACACATACAAATCTTAATGGGACTTGAATAGATCGGAATGAGTTGTTTGTCCCATTTAAAGGTTAAGCCTCATGATACAGAAATCTGCGTATATGTAAAGGGGTATAACGATAGATGACTTCCAGCTGTTGGAATTGTGCTGGGACCGTTTCAGTTTCAAGTCGGTCCACTCAAAACACTGAACATGAATTCTCTCCTCCATTTTTGGCATGCCACATGTCATGAAAACATCTGGAATGAAGGATACAAAAGTAATTCTAATTCAATATAGTTTTACGTAAACTGTACTTATATGGTGTATATGGGCAGTCAAATCACGGGGTACCAATTTTCCGAACAAAAGACGAGATGTActgaaagataaaaatataaattgcaatttCATACTCTGTTGCCAGCCGAAACCACCATCTATGTTTGCCTCAAAACAACGTTTGACTTTCAAGAAAACATCATCTTTTAAGTAAATTGGACTTTTATTTTCTGGCCTGTCCTGAAGGATTGGAGTATATCTGGTCACAAAGCAGCTTGCTGTAGATTTTCTAAATAGCGTGTTAGCTTGCTAGTTAAGTGTGTATTTGAGTGAGAGATGAAATGTGCGTCCAGGGCACTTAACAGTGATATTATTGGTCTGTTTTCTAGACCCACCATTTAAGAGAGTATTTTCTTGGCTCAAATTCACCTTTTCTTGAAGCTGATGTCTGAATTTTGTTTGTTACATTGGTTTTGTATACATGTCAAGCTTACGTTTTGaacatttgtattaaaacatgtttttggaagctc

Function

GO: NA

KEGG:

id description
K13139 INTS2; integrator complex subunit 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113376 lncRNA downstream 1725 10871806 ~ 10872087 (-) True G76618
TU113180 lncRNA downstream 413413 10436192 ~ 10460399 (-) True G76489
TU113191 lncRNA downstream 417300 10455591 ~ 10456512 (-) True G76493
TU113174 lncRNA downstream 428656 10424615 ~ 10445156 (-) True G76488
TU113138 lncRNA downstream 461974 10403957 ~ 10411838 (-) True G76458
XR_006251956.1 lncRNA upstream 55268 10947032 ~ 10950467 (-) True LOC122353057
TU113386 lncRNA upstream 68172 10959936 ~ 10987235 (-) False G76622
TU113385 lncRNA upstream 69396 10961160 ~ 10987235 (-) False G76622
TU113383 lncRNA upstream 94635 10986399 ~ 10987235 (-) True G76622
TU113387 lncRNA upstream 94635 10986399 ~ 10987235 (-) False G76622
XM_043250831.1 mRNA downstream 110915 10481653 ~ 10762897 (-) False auts2a
XM_043250826.1 mRNA downstream 110916 10481653 ~ 10762896 (-) False auts2a
XM_043250828.1 mRNA downstream 110916 10481653 ~ 10762896 (-) False auts2a
XM_043250830.1 mRNA downstream 110916 10481653 ~ 10762896 (-) False auts2a
XM_043250827.1 mRNA downstream 110916 10481653 ~ 10762896 (-) False auts2a
XM_043250187.1 mRNA upstream 1029 10892793 ~ 10945715 (-) True med13a
XM_043249941.1 mRNA upstream 81117 10972881 ~ 10983737 (-) False rps6kb1a
XM_043249940.1 mRNA upstream 81117 10972881 ~ 10983736 (-) True rps6kb1a
XM_043249946.1 mRNA upstream 154643 11046407 ~ 11079418 (-) False cltca
XM_043249945.1 mRNA upstream 154643 11046407 ~ 11079418 (-) True cltca
TU113196 other downstream 393623 10478059 ~ 10480189 (-) True G76498
TU113101 other downstream 490503 10380096 ~ 10383309 (-) True G76438
TU113103 other downstream 490503 10380096 ~ 10383309 (-) False G76438
TU113102 other downstream 492765 10380096 ~ 10381047 (-) False G76438
TU113078 other downstream 596111 10267354 ~ 10277701 (-) True fgf13b
XR_006251870.1 other upstream 84564 10976328 ~ 10983737 (-) False rps6kb1a
XR_006251871.1 other upstream 86172 10977936 ~ 10983738 (-) False rps6kb1a
TU113393 other upstream 125346 11017110 ~ 11038731 (-) True G76625
XR_006251915.1 other upstream 284805 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other upstream 284805 11176569 ~ 11205227 (-) False LOC122352715

Expression Profile