RNA id: XM_043251084.1


Basic Information

Item Value
RNA id XM_043251084.1
length 7714
RNA type mRNA
GC content 0.44
exon number 15
gene id mtus2a
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9325824 ~ 9389728 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGATAGACCGGGGTCGAGACAAAAATAGGAGTGGAGTGATGAACATGTGAAGAACCCCGTCAAGGTTGCAGCATCACCAAACGCACATCTGATAAAAGCCTAGGTTTGGCACCAGATGAATGAACAAGGCATTTCAAGGTTTCAAGCTGATGTGATGTCATCAAGTGCATTGCCCTGTTAAGAAGCAAACAAATACAGCTCAGTTCTCTTGAAATAGAAATGGAAAGAATGTAAGATTAGGTTTTGATTCTGCACTCCATCCAAACTGTAAACTTTAAAGCCTAGGTACAGGCACGTGAGAGAACAATACCTTTGATGGATCCAGGATTATCGTGGAGCTTTTGAGAGGGAAGCTCAGACTTATACAACATGAATGTGCAAGGAAAGATACAACCCGGTGAAGTAAACCAACAAGAGGAAATACAGAACGACGACAAGCAGCTTTTGCTAGAAACAGTGGAAGACGCCAATGCCAATCAAATCACCAAAGAGAACATTTATTCAGATGACAGAGAGCATGGCAGCCCACTACCCCCTTTGGTGTCGCACTCTGAAACCCAGGAGAGGATCATTATCTGGGGAACACATGCTCGAAGTGAAGACCCTGAGCTTGAAGAGTTTGAACTGCTGGAGTGTCAAGAGCTAGAAACATTTGTAgtggaagaagaagaacaggTGGCCATGCAGAGTGAAAGAAGCAGAAAGGGAGCAAAGCACTTCAGTGACAAAGAGTTGTCATCTACAGCCATCAGCACCACTGTTGGCTCCACTTGGAAAGACCACAATGAAAACCATAGTCTGGATGGAGATGCAAATGAGAACTCTCAGCCCCTTGACCTCAGGACCTCCAGCTCTCGCTCTGGTGCGAACCGGACCCTGAGAGATGCACGAAGTGGTTCTGAGAGCAATGTCTTTTCATCTTCTCTTTTTGCAGTGACCAGCCTCAGTGGAAGTTTAGCCAGTGCCCTGGACAGTGCAGGCCGCACACAGCCTCTCTCTTCCCAGTCCACCAAGTCTACCTCAGACAAAGGCAGGAACCAGCATCCAGCTACGACCGAGTCCTACATCCACTCAGAGAGAAACAGGGAGCTTCCCAGGGATTTGGACCAAAACCATAACTCTACCACACTGCCTCAGGAACCACAATATGACCGAAGTAAGCTAATGCATCCTTCATATGGAGcagtaaaactgcaaaaatttCAAATGGAAACAGAACAGAATGCTGGGAAAAGGACGTCAACCGAGGTGCCGAAAGGTATGGTGAGGGTGCTACCTTCTTGTAGGCAGCTAGTCCGCCCTCTTTCTACTGAAAAACGAATAACCTCAGGATACCCCAGCATAGACACCCAGGTAGACCAGCAACAATCCCACTCCTCAGAGACGGGTCAGAGCCATCCACAAGTGCTGCCGACTACAGAGGTCAACAGCAATCCCATCGTAGACTCACAGACTCCTTCAAATCAGACTTTTACACGAGAAGCCCAACGCTTGAAGAGGCAAAGCTCAGCAGATCGTGCTGCAAGTCCCTCCAGCCTAGAAAGGAAGACTCACTTCAGCCGACGGGCCTACAGCAGTCCAACTAGACCTTCAACACCTCCATCCCCCAAGATCACAAGGTCTCCTCAAAGACAGCCTCCTTCCTCACCTATCAAGACTTTACCTTCTCGAGGTCCTCAGTTGGGTTTTGCTGGGTACAGCTCTGGCTTAAGAGCCCCAGTTAAAACCACAATCAACACTAACATCCATAAAACTCCTCCACAGCAGGCGTCAATGGAGACCTCCCCTCCAAGCAAGTGCCTGCCAAAACCGAAAAGCGTCCGGCCCAAAATCATTACGTACATTCGGAAGACGCCCCAGGTAAAACCCCAGTCTCTTGAAGGAACTTATGAGGTGTCATCCTTACCTACAAGACTCTCAGCATATGGCAACACACAAGCCAAACCATCCATTGGAGATCAAGGGGAAGCCGCTGTGCTGAGTGCCTCGAATTTACTCTATGATAAGTATCGTCAAGAGATGCAGAAAGTCCGGTTATTCTCGCCTGGACTCATGGTGTCTGGGATTAAGCCACCCAGCAACACCATGCCCCATAAAATGGCAGGCAGAGCAGATAGCTTCTATGGGCCTTTCAACAAGCCTCTATCTGCAGCGGCAGGCAGATCTCCATTAGCTCTTGGGTCTCCAATTTGTGGATCCGAAGACCCTTCTGGACCCTCTATGGGAGCACAGGATATGGGGAGTCTTTATCGTCCATCACGGGGCCTAAGACCCCAGCTAGGTGTTGGTGCTGTAAATAGGACTCCCTCTGCAGCTGCCAAGAGCAGAATGGTCTTAACAAGCCAGCCAAAGTCACCACTGGCCCTCAGTCAACCAATGCAGGCAGTAAACCCTACTACTCAAACCCCTCAGGAACCTCAAGATCAGAGAAAGCCAGTGGCGACTGGGTTAGCCGCTAAATCCCTTCTGCCGAAGCCGGCTCAGTCTCAGTCTGGCCTGCGTCCACCCGGTTACTCGCGTCTCCCACCAGCTCGTCTCGCCGCCTTTGGGTTTGTTCGGAGCTCTAGCGTCTCCTCTGTGTCCAGTAACCACTCGACCGACAGCACACGGAGTGACCCCTGCCGACCCGCATACCGTCCCAACAGTGTAAATGATGAGCCACCACCGCTTCACCGCGTCACCACGTCCCCTCCTGGAGACGGATCCAGAGCACCGTGCCGTAGCACCCCTCAACCCCCCAACACCCCTGCACCCACACGCCGCTCCCTGCTGCCCCCTCCTCGAAGCTCCCCCGTGGCATCCCGTAAGGAATTCCAGAAgagttctgacggcacccgttcatcTCTCTCCTCCCCTAAGAGACTCGCTGTAGTGTCTCCTAAACCACAGTCTCCAGTCCTTCAGAGGCAACAGAGGGCAACAGTGGCGGTCCGAGGCTCAAGCGTGCAGATTTTGCCTCGCACCGGCTCTCCGGGcccagagaagaaaaaagaagaagaggagaagaaagaaaaggagcGAGAGGAAGTAGAGAGGCATGAAGAGATGCAGCTCTTGCAGGGTCGCTGTGAAGATCAGGCCAGGCAACTACAGACTCTTCAGACAGAGCTAAAGAAAACCAACATGAGTCTGGAGGTCTTTGTGATCTGCACTCAGCACTTCTCCCTCAAGagtgAAAGTGCtgaggagaaggagagagagttGTCCCAGGAACTCAGCCGGATTCAGCATGAAGTGGCCTTTAACGCAGCACGCTGGGAGCGTCTTCAGAAGGAGAAGAGAGAGCTGGAGGAGTGTTTTGAGAGGGAGCTGAGAGAGTTACAGGTCCAGCAGGAGTCTGAGCTCGCTACCGTAGAGGAGAACCTGAGATTACGGCACGCTTCAGACCGAGACCATCTCAGAGCAGAGCACCAGTCAGAGGTGGAGGAGCTGCATACCCAGCACCAGGAACAGATTGAAGAGTTAACTGCCAACCACGAGGCTGCCCTTGAAGACCTGAAGACCATGCACAACATCACTATGTCAACACTGCAGGAAGAGCATGCCAGGACCATGAGGGacTTAAGGAAAGCCCATGAGCAGCAAAAGGCCAGTCTAGAAGAGGACTTTGAGAAACTGCGCCTCTCGCTTCAGGACCAAGTGGACACTCTGACTTTTCAGAACCGGACTCTGAAAGATAAAGCCAAGCGTTTTGAAGAAGCTCTGAGGAAGAGCACTGACGAACAGATTGTAGATGCGCTGGCACCATATCAGCACATCGAGGAGGATTTGAAGAGTCTGAAGGAGGTTTTGGAGATGAAGAATCAGCAAATTCACGACCAGGAGAAGAAGATATGTCATTTGGAGAAAGTGCAGGCTCAAAAGAACCTGTATTTGGAGGAGCGGGTCCAGGTGCTTCAGCAGCAGAATGAAGACCTGATGGCCCGCATTGACCGTCATCTCACAGTCTCAAGACAACTGTCTGAGGAGAACGCAAACCTTCAGGAGTATGTGGAGAAGGAGACGAATGAGAAGAAACGGCTGAGCCGCAACAATGAAGAGCTGCTCTGGCTTCTCCAGACGAGTCCCCATCTGTCTCCTTCCTCTTCTCCCATCCACAGAGCCTTCTTCCCCGGGCCGGATATCCCTCCTTACCCCTACTCTCCGGGTCCCGGGACCCCCACACACTCCTGTTCTCCGGGCCCCTGTACACCCACTCACAAGGTGGCGTCTTCAGCACCAGGGACGCCCACTCTCAGAGGCTCACCAGCAGCACGCTCGTCCCCTGCTCGGATCCCAAACGCCAACACTTTACCCAGATGAGCCCCGGCCACTTCCATCGCCCATTTCCTGCAGACCATCacaggttttatttattaagataaTGTCAACCCCAGCGGCCAGACATCCTTTGTCACTTCTGTTTATTGactcaaaaatgtttcttttttttttgtctcagagAATCGTATTGCGTAAATGCATAGCATCGGAATAAAAGAGCTAAcgatgctaatgctaatgctcaTGATGTGCTGCCAACAATGCTTGGCCTGCATGGAGGCAGGACCATTTTTGTGAATACAGAAGTAGCTCAACTTTGACTCTAAACATGCTGTTGGGCCCCAACACAAATGTCTGTAGTTTCTTCTGAATGACATACGAGAACTTTATACAACAAAAAGCACTTTAGGTTTCTGCCCTACCTTCTTCCTACAGATAAATGCACCAGCATTTTTGTGgtctggtttatttttttatgcgcTATGTTTTCTGATTTTACAAATCTCCCAAGTTCTAAATTTAGAATGTTTCAAATTAGTCAAGACATATATACtgcaaaatatcattttcttaatttttttttcttacagtaaaATTACCATCGTATTCTTACAAATTACATTgagcatcatttttattttattttatttttttatcctatCCCCATGGGATTTTTGTAAAGTAtaactttaaatatacataCGCTACCATTCACAACctgacaaaaaaatttttataagaTGCCAAAAAGTTTTGTGACATATTTGGTGCTAAAAGAGTGGagctaaaagtgtttttttcccagaaCAGATGTACATACATATTGAAATTGGTTTTGTAAGTGTTTCGCTCCGGTTCTAAACTGAGATGTCCATTGAGTGTCTAACGCTcagtgactttttaaaataacgtAACATCCGGCGAATCTAAAAACGCAATCGCAAGCATGCTTATTagctttaaaatacacaataaaaatagtaataatgtgaaatattattaccattttaaaaatagctgtttctatttgaatacatttttaaaaaacaagcaaaaatgcttattaagaaaatgatttttcgCAGTATAATGGCCTTTTCACATTGTCTTAACAAACTGCCATGCCTTCCACCGGTGCAGTATGTTTTCCAGGACCCTCCAAAAGCCTAATCCAGCTACTTTACAAAAccagctttttttaaagcaagcgtTTCTTCATACACAAATCAGTTTGCTGAAATGACACCTTCGCTGGCACAGATTCGTTGTGGCGGCTTGGTTAacaagacgaaaaaaaaaacaaaaaactcttCAGCGTCAAGTCTGTTCTTCCTAACTTATCTGACAAAAGCAAGTGCTCTCACTTCATGCATGACCTAAAACAGGGAGATCAAGCAAATGTATAGGTACCGACTACAGGAAATGTTGTAAATTGTAGTTGTAATTTTTCTTAGTACTTTGTAATTTAATGGACATTTTGCTACTTGATGTGCATGTGACGTAAGTCTTCCATTCTTAATGTGAATCTTAGGATAGTTGTCATGTTAGAGTAGATACTCAGACTCCTGAGGATGGTAGCGTCCACCTCTGAAGAGATTTTGAAACATTTGAGAACGATATTTTACCCATAGCTACTAGGACAGGAGTTTGTTCTTCACGTCACACCTGTCAGAGGTGTGCTGCAGGTACGTCATAGATGTGTAAAGGTTTTATAGAGGTACAATACGGCAGTTAAACTTAGGTTCGGATTTATCTTTGTTGTAATGCTGGTTACCTCTTGTATTACCTCTGTAGAGCGTAGCATAACCTATAGAGAGAGGTTTCTCTGTATGAGTGAGCTAGAAAAGAATGTAACTGTGTCTTTAAATGTTGTACGATAAAGTTCAGGGAAATTACTTAGCTCTGTTTTAAAGGCAGTTCTCAGTTTTTCAGCAAAAcgtgatattttttgtttttgttttttttaaatgaacaataagAAGACATTCCTCTTGCAAAGCGCGTTTTGATATTTCAAAACGAAGAGGccatttctttgaatttttgaaaaattggaatttattttatttaattttttttttcttttttttttggttcgtGTATTTCTACGATTGATACATCTTTCAATGGTCAACCTTTGACACTTTTGATACGAATGAGAATTTTTGTAAACTCTTCACtgataatatttttctattatcaGTTGGTGCTTGTACAGGGTATCATACACAGAAATACAATAATCCGCTATTCAAGACCAGCAATCTACaaaaaatccacacacacacagcaaacgtgtatttgcaggtgtttttcttcatttgagACCCTcttgtttacagtttttttttaattactgtgaaatgtatttttatcctatttttaatgcattttcaattaTGTAGCTTTGcattttgaattcatttcatttgcttCTGTCACTGTGATAGAAACGATGTGTCGTTTGTTCAGTTTTTGCTACTCTGGCACAGATTCCAAGGAGTTTTCTGGATGTTTCTTATCAAGCACAATACTGCGATAGTAACACGTCTAAAATTCTGAATGATTTTGATTCACAACAAGTAGTAGatcatttttttcaggaatGTGCCTTCATTTATTGTGCAAAGtagcaaaaatgaaaaggttaTTACACTATAGCCACTTAACAAACAGGTTATTCTGGTTTAATaccagaaaataaattaattttaaaatatcggtttgcttattttatttattaataataattattatttacttaattattttaaaacttttttaattaattttcgattttgatttttgctttactttttttttcatattgtgtatttatgctCTAAATTAATGTCTcgacaaaaaaaacctcagcaACCTCAATCTGCACCTGCTATGGTTTATTACAAAGTACAAAATTGTTACTAATCTACATTTACTAAAAGGAGTagatatgtatttaaatgtatacttaAATCCTGTTTTGCTTTCTCTATGGCCCTTCGCTATGGCATTGGTCCATAGATTATAATGAATGATATGAAACGACAGAATCCCGTTCTTTGTCCCGTGGACATCTAAACTACTGAATGTTACCTTACCCCTGATAATACTGACACGGTCAATGTAAACTGAAGTGGTGGAGTCACTTATTGGACTGAATGAAATTTGTCCATCTGTCTATTTACTAACATTTGACTTCTATTATGTCTTTTCTGACTGGATTTACAGTCGTTTGTAAGCTATTTATTGTGTTGTAGTGCACAGTAATCGATGCATGTTTGTCTTGGATGGATCATTCCTTCAACTTGTACGTTTTCGACTTGTGATGGTTCACGCTGTAACTGTAgcatagaaaatataataaggAATGGaaagaatttatatataactcATTTGTATTCACTATAGGGGGGTGGggatgaatattaaaatgtttaaaaaaaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112468 lncRNA upstream 43147 9277433 ~ 9283648 (+) True LOC122353086
XR_006251959.1 lncRNA upstream 45986 9277564 ~ 9280809 (+) False LOC122353086
TU112466 lncRNA upstream 53506 9266815 ~ 9273289 (+) True G75984
TU112452 lncRNA upstream 73314 9245998 ~ 9253481 (+) True G75974
TU112404 lncRNA upstream 614597 8708754 ~ 8712198 (+) True G75934
TU112687 lncRNA downstream 323099 9712827 ~ 9713108 (+) True G76150
TU112705 lncRNA downstream 373278 9763006 ~ 9766783 (+) True G76162
TU112735 lncRNA downstream 433236 9822964 ~ 9824196 (+) True G76182
TU112737 lncRNA downstream 435189 9824917 ~ 9825970 (+) True G76184
TU112829 lncRNA downstream 495541 9885269 ~ 9902178 (+) True G76248
XM_043250342.1 mRNA upstream 2915 9303636 ~ 9323880 (+) True slc7a1a
XM_043250343.1 mRNA upstream 2915 9303638 ~ 9323880 (+) False slc7a1a
XM_043250916.1 mRNA upstream 24161 9290851 ~ 9302634 (+) True paxbp1
XM_043249832.1 mRNA upstream 119460 9076866 ~ 9207335 (+) True gbe1a
XM_043249831.1 mRNA upstream 241136 9070840 ~ 9085659 (+) True LOC122352417
XM_043251189.1 mRNA downstream 1162 9390890 ~ 9395702 (+) True LOC122353220
XM_043251190.1 mRNA downstream 1162 9390890 ~ 9395702 (+) False LOC122353220
XM_043250718.1 mRNA downstream 18194 9407922 ~ 9416339 (+) True vps36
XM_043250709.1 mRNA downstream 26755 9416483 ~ 9422807 (+) True LOC122352939
XM_043250710.1 mRNA downstream 26755 9416483 ~ 9422807 (+) False LOC122352939
TU112450 other upstream 174176 9149791 ~ 9152619 (+) False gbe1a
TU112407 other upstream 591799 8733779 ~ 8734996 (+) True G75937
TU112405 other upstream 610518 8713203 ~ 8716277 (+) True G75935
TU112216 other upstream 745693 8580299 ~ 8581102 (+) False LOC122352912
TU112127 other upstream 1223871 8101476 ~ 8102924 (+) True G75750
TU112684 other downstream 302478 9692206 ~ 9699748 (+) False map3k7cl
TU113296 other downstream 1749184 11138912 ~ 11146033 (+) False LOC122352518
TU113543 other downstream 2333034 11722762 ~ 11724767 (+) False hyou1
TU113542 other downstream 2335520 11725248 ~ 11726005 (+) False hyou1
TU113655 other downstream 2894651 12284379 ~ 12285541 (+) False tmem218