RNA id: XM_043251123.1


Basic Information

Item Value
RNA id XM_043251123.1
length 1502
RNA type mRNA
GC content 0.46
exon number 9
gene id drg1
representative True

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5447331 ~ 5451955 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGAGCGTGGCGTGAACTCATGGCAAAGCATGACAACGGTGTGCTTTTGAGCCAACAAGCTCTATAACCGAATAAGTAAcatcaactttttatttttcaagtaacGATTTTGAGAGGACCGACGCCAAAATGAGTTTACTGGCCAAAATAGCTGAAATCGAGAACGAGATGGCTCGTACTCAGAAGAATAAGGCCACAGCTCATCATTTGGGTTTGCTGAAGGCCAGATTGGCCAAACTGAGGAGAGAGCTCATCACTCCTAAAGGAGGCAGTGGAGGAGGCACTGGGGAGGGTTTCGATGTGGCAAAAACTGGTGATGCTCGAATCGGATTTGTGGGCTTTCCCTCAGTGGGCAAATCCACTCTTTTGAGTAACTTGGCTGGTGTGTACTCTGAGGTCGCTGCCTATGAGTTCACCACACTGACAACTGTACCAGGAGTGATCCGTTATAAAGGAGCCAAAATTCAGcttctggATCTCCCAGGTATCATTGAGGGAGCGAAAGATGGCAAGGGAAGAGGGCGGCAAGTCATTGCTGTTGCTCGCACATGCAACCTCATCCTGATTGTCTTGGATGTTCTGAAGCCTCTCGGACACAAGAAGCTCATTGAACACGAGTTGGAAGGTTTTGGCATCCGGCTCAACAAGCAACCTCCAAATATCGgtttcaaaaagaaagacaagGGCGGAATCAACTTCACCGCAACTtgTGCTCAAAGTGAACTGGACTCTGAGACCGTAAAAAGCATCCTTTCGGAATATAAGATTCACAACGCAGATATAACCCTACGAAGCGACTCCACGGCTGACGACCTCATTGATGTGGTGGAGGGAAACCGGGTTTACATCCCCTGCATCTACGTACTCAACAAAATCGACCAGATCTCCATCGAGGAGCTAGACGTTATCTACAAAATCCCTCACTGCGTGCCAATCTCAGCTCACCACCGCTGGAACTTTGACGACCTGTTGGAAAAGATCTGGGACTACCTGCATCTAGTGCGCATCTACACGAAGCCGAAAGGACAGCTTCCTGATTACACGGCACCTGTAGTGCTTCCAGATGGGAAGACATCTGTCGAGGACTTCTGCTTAAAGATCCACAAAAACCTTATCAAAGAATTCAAATATGCATTAGTGTGGGGGTCGTCAGTGAAGCATAACCCGCAGAAAGTCGGCAAAGACCATGTCCTAGAAGACGAGGATGTAATCCAGCTGGTCAAGAAATAAAAGAACTCTGATGTGTGCATGATCATCACACTTCACATAAGAAGTGATGGGACATTTCTAAATGCCCTGAAGGTTCCCATGGCACCATTgtcgtttctttgtttttatttttggacaaaGTATGATTGTAAATCACACAGATTCATTCGGCATATTAAATAATGTCTTCTTGTGCTCAGATCGGCATCACAATGGCTTGAATGCAGTTATAGATTAAATGCATCTATGGTCTGCAAAACAAAGTGAACTTCAATAAAAACCTTATATGCAAA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110997 lncRNA upstream 61476 5383139 ~ 5385855 (+) True G74992
XR_006251886.1 lncRNA upstream 207773 5238279 ~ 5239558 (+) False LOC122352567
XR_006251887.1 lncRNA upstream 207773 5238279 ~ 5239558 (+) False LOC122352567
TU110922 lncRNA upstream 211376 5235599 ~ 5235955 (+) True G74958
TU110852 lncRNA upstream 329682 5116866 ~ 5117649 (+) False LOC122352404
TU111012 lncRNA downstream 4416 5456371 ~ 5458861 (+) True G75007
TU111104 lncRNA downstream 111748 5563703 ~ 5606701 (+) False G75067
TU111105 lncRNA downstream 111748 5563703 ~ 5638236 (+) True G75067
TU111114 lncRNA downstream 190934 5642889 ~ 5643101 (+) True G75076
TU111115 lncRNA downstream 191594 5643549 ~ 5643766 (+) True G75077
XM_043250805.1 mRNA upstream 895 5411683 ~ 5446436 (+) True kcnn2
XM_043250803.1 mRNA upstream 895 5411684 ~ 5446436 (+) False kcnn2
XM_043250804.1 mRNA upstream 2718 5411684 ~ 5444613 (+) False kcnn2
XM_043251132.1 mRNA upstream 89876 5333010 ~ 5357455 (+) True sppl3
XM_043249821.1 mRNA upstream 323958 5117849 ~ 5123373 (+) True LOC122352404
XM_043249966.1 mRNA downstream 13002 5464957 ~ 5477005 (+) True slc20a1b
XM_043249967.1 mRNA downstream 13002 5464957 ~ 5477005 (+) False slc20a1b
XM_043250909.1 mRNA downstream 30810 5482765 ~ 5491729 (+) True pigo
XM_043250000.1 mRNA downstream 46692 5498647 ~ 5500388 (+) True ccl19b
XM_043251118.1 mRNA downstream 67213 5519168 ~ 5545588 (+) False phf24
TU110943 other upstream 188508 5256838 ~ 5258823 (+) True G74965
TU110926 other upstream 197194 5238428 ~ 5250137 (+) False LOC122352567
TU110925 other upstream 197194 5244590 ~ 5250137 (+) True LOC122352567
TU110913 other upstream 324059 5121489 ~ 5123272 (+) False LOC122352404
TU110851 other upstream 326677 5117851 ~ 5120654 (+) False LOC122352404
TU111017 other downstream 46726 5498681 ~ 5500304 (+) False ccl19b
TU111087 other downstream 108696 5560651 ~ 5562085 (+) True G75062
XR_006251967.1 other downstream 609236 6061191 ~ 6089587 (+) True lrrtm4l1
TU111380 other downstream 1002381 6454336 ~ 6472107 (+) False LOC122352486
TU111650 other downstream 1690338 7142293 ~ 7150581 (+) True G75422

Expression Profile