RNA id: TU115670


Basic Information

Item Value
RNA id TU115670
length 409
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G78162
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 430994 ~ 431422 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cagagagacagagagacagagagagagacagacagagagagagacagagagagagagagagagagagagagagagagagagagagagacagagagacagagagagagacagagagagagacagagagagagactcatgTTTACAGGATTTATTCATGATGTTGACATTTTCCGACTTGAACCCGTGACCTTGGTGTTGCTCCACGTAGAAGAGGAATCTCATCGTTTGGTCTTTTTAGTATTTCTCAATCCAGTGAGGACTGCTTCTCTCTACAGAGACTCTGTAAATACCTTGAATCCCGCTCTCGCCCCAGACTGAAGGTCAGACTCGATGTTCCCGGGGTCCAGGTAGGCGATGCTCATCAGGAAGCCCGGCCCAGTGAAGGCCCAGAGTTTCCGAAAGCTAAAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115663 lncRNA downstream 26014 403133 ~ 404980 (-) False LOC122353669
TU115664 lncRNA downstream 26014 403246 ~ 404980 (-) False LOC122353669
TU115623 lncRNA downstream 106038 324198 ~ 324956 (-) False LOC122354324
TU115606 lncRNA downstream 127776 160995 ~ 303218 (-) True G78132
TU115673 lncRNA upstream 265 431687 ~ 438660 (-) True G78164
TU115642 lncRNA upstream 12463 443885 ~ 448901 (-) True G78144
TU115646 lncRNA upstream 12463 443885 ~ 448901 (-) False G78144
TU115678 lncRNA upstream 26871 458293 ~ 506641 (-) False G78167
TU115679 lncRNA upstream 72704 504126 ~ 506641 (-) True G78167
XM_043251541.1 mRNA downstream 5329 414402 ~ 425665 (-) True mettl1
XM_043251540.1 mRNA downstream 18409 406021 ~ 412585 (-) True LOC122353667
XM_043251542.1 mRNA downstream 25583 402940 ~ 405411 (-) True LOC122353669
XM_043252461.1 mRNA downstream 36808 386034 ~ 394186 (-) True si:ch1073-456m8.1
XM_043251510.1 mRNA downstream 45670 374160 ~ 385324 (-) True avil
XM_043251608.1 mRNA upstream 480253 911675 ~ 933876 (-) False vgll4b
XM_043251609.1 mRNA upstream 480253 911675 ~ 925758 (-) True vgll4b
XM_043251605.1 mRNA upstream 502430 933852 ~ 939272 (-) True tamm41
XM_043251604.1 mRNA upstream 502430 933852 ~ 939267 (-) False tamm41
XM_043251607.1 mRNA upstream 502430 933852 ~ 939103 (-) False tamm41
XR_006252075.1 other downstream 142048 282263 ~ 288946 (-) False LOC122353949
TU115653 other downstream 150417 279995 ~ 280577 (-) False LOC122354323
TU115630 other downstream 205182 218386 ~ 225812 (-) False LOC122353952
TU115639 other upstream 12463 443885 ~ 448901 (-) False G78144
TU115640 other upstream 12463 443885 ~ 448901 (-) False G78144
TU115643 other upstream 12463 443885 ~ 448901 (-) False G78144
TU115685 other upstream 21712 453134 ~ 455998 (-) True G78170
TU115720 other upstream 268521 699943 ~ 775965 (-) False G78195

Expression Profile