Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115709 |
| length | 333 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G78192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 592615 ~ 594641 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115678 | lncRNA | downstream | 85974 | 458293 ~ 506641 (-) | False | G78167 |
| TU115679 | lncRNA | downstream | 85974 | 504126 ~ 506641 (-) | True | G78167 |
| TU115642 | lncRNA | downstream | 143714 | 443885 ~ 448901 (-) | True | G78144 |
| TU115646 | lncRNA | downstream | 143714 | 443885 ~ 448901 (-) | False | G78144 |
| TU115673 | lncRNA | downstream | 153955 | 431687 ~ 438660 (-) | True | G78164 |
| TU115721 | lncRNA | upstream | 4466 | 599107 ~ 775965 (-) | False | G78195 |
| XR_006252069.1 | lncRNA | upstream | 124634 | 719275 ~ 721631 (-) | True | LOC122353904 |
| TU115761 | lncRNA | upstream | 127823 | 722464 ~ 723564 (-) | True | G78226 |
| TU115717 | lncRNA | upstream | 135756 | 730397 ~ 741300 (-) | True | G78195 |
| TU115719 | lncRNA | upstream | 135756 | 730397 ~ 741300 (-) | False | G78195 |
| XM_043251541.1 | mRNA | downstream | 166950 | 414402 ~ 425665 (-) | True | mettl1 |
| XM_043251540.1 | mRNA | downstream | 180030 | 406021 ~ 412585 (-) | True | LOC122353667 |
| XM_043251542.1 | mRNA | downstream | 187204 | 402940 ~ 405411 (-) | True | LOC122353669 |
| XM_043252461.1 | mRNA | downstream | 198429 | 386034 ~ 394186 (-) | True | si:ch1073-456m8.1 |
| XM_043251510.1 | mRNA | downstream | 207291 | 374160 ~ 385324 (-) | True | avil |
| XM_043251608.1 | mRNA | upstream | 317034 | 911675 ~ 933876 (-) | False | vgll4b |
| XM_043251609.1 | mRNA | upstream | 317034 | 911675 ~ 925758 (-) | True | vgll4b |
| XM_043251605.1 | mRNA | upstream | 339211 | 933852 ~ 939272 (-) | True | tamm41 |
| XM_043251604.1 | mRNA | upstream | 339211 | 933852 ~ 939267 (-) | False | tamm41 |
| XM_043251607.1 | mRNA | upstream | 339211 | 933852 ~ 939103 (-) | False | tamm41 |
| TU115685 | other | downstream | 136617 | 453134 ~ 455998 (-) | True | G78170 |
| TU115639 | other | downstream | 143714 | 443885 ~ 448901 (-) | False | G78144 |
| TU115640 | other | downstream | 143714 | 443885 ~ 448901 (-) | False | G78144 |
| TU115643 | other | downstream | 143714 | 443885 ~ 448901 (-) | False | G78144 |
| XR_006252075.1 | other | downstream | 303669 | 282263 ~ 288946 (-) | False | LOC122353949 |
| TU115720 | other | upstream | 105302 | 699943 ~ 775965 (-) | False | G78195 |
| TU115722 | other | upstream | 105302 | 699943 ~ 775965 (-) | False | G78195 |
| TU115726 | other | upstream | 105302 | 699943 ~ 775965 (-) | False | G78195 |
| unassigned_transcript_1475 | other | upstream | 511704 | 1106345 ~ 1106416 (-) | True | trnac-gca_5 |
| unassigned_transcript_1476 | other | upstream | 512138 | 1106779 ~ 1106850 (-) | True | trnac-gca_6 |
