Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU116630 |
| length | 651 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G78797 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 3001119 ~ 3002991 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116609 | lncRNA | upstream | 187837 | 2812377 ~ 2813282 (+) | True | G78784 |
| TU116594 | lncRNA | upstream | 300416 | 2700395 ~ 2700703 (+) | True | G78772 |
| TU116577 | lncRNA | upstream | 512566 | 2488214 ~ 2488553 (+) | True | G78757 |
| TU116442 | lncRNA | upstream | 1062033 | 1936860 ~ 1939086 (+) | True | G78674 |
| TU116417 | lncRNA | upstream | 1102056 | 1898733 ~ 1899063 (+) | True | G78652 |
| TU116652 | lncRNA | downstream | 112434 | 3115425 ~ 3116430 (+) | True | G78815 |
| TU116746 | lncRNA | downstream | 285210 | 3288201 ~ 3291400 (+) | True | G78886 |
| TU116758 | lncRNA | downstream | 383290 | 3386281 ~ 3391193 (+) | False | tmem167b |
| TU116759 | lncRNA | downstream | 388573 | 3391564 ~ 3391790 (+) | True | G78898 |
| TU116921 | lncRNA | downstream | 536997 | 3539988 ~ 3541069 (+) | True | G79002 |
| XM_043252544.1 | mRNA | upstream | 195532 | 2800056 ~ 2805587 (+) | True | LOC122354390 |
| XM_043251559.1 | mRNA | upstream | 308080 | 2682706 ~ 2693039 (+) | True | ccdc3b |
| XM_043252912.1 | mRNA | upstream | 324637 | 2666508 ~ 2676482 (+) | True | si:ch211-236d3.4 |
| XM_043251383.1 | mRNA | upstream | 583661 | 2182199 ~ 2417458 (+) | True | fhit |
| XM_043251703.1 | mRNA | downstream | 35438 | 3038429 ~ 3046680 (+) | True | nek4 |
| XM_043251704.1 | mRNA | downstream | 35438 | 3038429 ~ 3046680 (+) | False | nek4 |
| XM_043251706.1 | mRNA | downstream | 45783 | 3048774 ~ 3052076 (+) | True | glt8d1 |
| XM_043251702.1 | mRNA | downstream | 55384 | 3058375 ~ 3076439 (+) | True | LOC122353826 |
| XM_043251700.1 | mRNA | downstream | 55384 | 3058375 ~ 3076439 (+) | False | LOC122353826 |
| TU116622 | other | upstream | 174325 | 2825539 ~ 2826794 (+) | True | G78790 |
| TU116585 | other | upstream | 320977 | 2678135 ~ 2680142 (+) | True | G78763 |
| XR_006252148.1 | other | upstream | 1122992 | 1878021 ~ 1878127 (+) | True | LOC122354697 |
| unassigned_transcript_1620 | other | upstream | 1124205 | 1876831 ~ 1876914 (+) | True | trnas-gcu_27 |
| unassigned_transcript_1619 | other | upstream | 1124430 | 1876619 ~ 1876689 (+) | True | trnap-agg_19 |
| TU116720 | other | downstream | 267208 | 3270199 ~ 3272619 (+) | False | camk2n1 |
| TU116721 | other | downstream | 267692 | 3270683 ~ 3272619 (+) | True | camk2n1 |
| TU116739 | other | downstream | 355268 | 3358259 ~ 3361290 (+) | True | LOC122353713 |
| XR_006252154.1 | other | downstream | 743659 | 3746650 ~ 3746742 (+) | True | LOC122354703 |
| XR_006252155.1 | other | downstream | 743936 | 3746927 ~ 3747012 (+) | True | LOC122354704 |
