RNA id: TU119513



Basic Information


Item Value
RNA id TU119513
length 357
RNA type TUCP
GC content 0.55
exon number 2
gene id eif4a3
representative False

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11528719 ~ 11535114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGTCACAGCTGCGACACACGCGGCTCTTCCGTTCGGCCTGCAGACGCGCTTTCACGTTTTAACTCGTAATTTATAACCGAAATCCGTGATAATTATGGCCGCCGCCGCAGCTCCCGTGAGGAAGAGGATCCTGAAGGAGGAGGACATGACGAAGATCGAGTTTGAGACGAGCGAGGAGGTGGATGTGACGCCGACGTTTGACACGATGGGCCTGAGGGAAGACTTACTGCGCGGGATCTACGCGTACGGTTTTGAGAAACCATCTGCGATCCAGCAGCGAGCCATCAAACAGATCATCAAGGGACGAGACGTCATCGCCCAGTGAGTCCTGCTGGAGATCTGTTCTGGAGAAAGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119509 lncRNA upstream 16840 11511474 ~ 11511894 (+) True G80809
TU119508 lncRNA upstream 19681 11508000 ~ 11509053 (+) True G80808
TU119503 lncRNA upstream 56433 11471971 ~ 11472301 (+) True G80804
TU119287 lncRNA upstream 76596 11449049 ~ 11452138 (+) True G80668
XR_006252073.1 lncRNA upstream 81214 11443647 ~ 11447520 (+) False LOC122353945
TU119516 lncRNA downstream 19979 11549615 ~ 11555713 (+) True G80814
TU119526 lncRNA downstream 27326 11556962 ~ 11559047 (+) True G80819
TU119535 lncRNA downstream 41466 11571102 ~ 11571431 (+) True G80825
XR_006252094.1 lncRNA downstream 128250 11657886 ~ 11672957 (+) False LOC122354243
TU119594 lncRNA downstream 153288 11682924 ~ 11683244 (+) True G80860
XM_043251321.1 mRNA upstream 1801 11525023 ~ 11526933 (+) False rpl37a
XM_043252192.1 mRNA upstream 5076 11512333 ~ 11523658 (+) True LOC122354143
XM_043252195.1 mRNA upstream 21017 11505653 ~ 11507717 (+) False LOC122354145
XM_043252196.1 mRNA upstream 28812 11486516 ~ 11499922 (+) True orc2
XM_043251850.1 mRNA upstream 43252 11470319 ~ 11485482 (+) True ldb1b
XM_043252522.1 mRNA downstream 10042 11539678 ~ 11547713 (+) True opn6a
XM_043251529.1 mRNA downstream 68154 11597790 ~ 11599698 (+) True map1lc3c
XM_043252117.1 mRNA downstream 168688 11698324 ~ 11700214 (+) True tomm20b
XM_043252113.1 mRNA downstream 176472 11706108 ~ 11715351 (+) True tbce
XM_043252115.1 mRNA downstream 176472 11706108 ~ 11715351 (+) False tbce
TU119512 other upstream 1692 11525059 ~ 11527042 (+) True rpl37a
TU119266 other upstream 20963 11505682 ~ 11507771 (+) False LOC122354145
TU119267 other upstream 20963 11505682 ~ 11507771 (+) True LOC122354145
TU119444 other upstream 302112 11222347 ~ 11226622 (+) True G80761
TU119245 other upstream 866764 10641132 ~ 10661970 (+) True G80638
TU119538 other downstream 50390 11580026 ~ 11672938 (+) False LOC122354243
TU119539 other downstream 50390 11580026 ~ 11660942 (+) True LOC122354243
TU119601 other downstream 168728 11698364 ~ 11700214 (+) False tomm20b
TU120019 other downstream 331306 11860942 ~ 11863112 (+) False LOC122353892
TU120138 other downstream 663118 12192754 ~ 12225492 (+) False G81213

Expression Profile