Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043252731.1 |
| length | 1532 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 12 |
| gene id | eif4a3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 11528719 ~ 11535114 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | biological_process |
| GO:0006417 | regulation of translation | biological_process |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0051028 | mRNA transport | biological_process |
| GO:0016607 | nuclear speck | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K13025 | EIF4A3, FAL1; ATP-dependent RNA helicase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU119509 | lncRNA | upstream | 16825 | 11511474 ~ 11511894 (+) | True | G80809 |
| TU119508 | lncRNA | upstream | 19666 | 11508000 ~ 11509053 (+) | True | G80808 |
| TU119503 | lncRNA | upstream | 56418 | 11471971 ~ 11472301 (+) | True | G80804 |
| TU119287 | lncRNA | upstream | 76581 | 11449049 ~ 11452138 (+) | True | G80668 |
| XR_006252073.1 | lncRNA | upstream | 81199 | 11443647 ~ 11447520 (+) | False | LOC122353945 |
| TU119516 | lncRNA | downstream | 14501 | 11549615 ~ 11555713 (+) | True | G80814 |
| TU119526 | lncRNA | downstream | 21848 | 11556962 ~ 11559047 (+) | True | G80819 |
| TU119535 | lncRNA | downstream | 35988 | 11571102 ~ 11571431 (+) | True | G80825 |
| XR_006252094.1 | lncRNA | downstream | 122772 | 11657886 ~ 11672957 (+) | False | LOC122354243 |
| TU119594 | lncRNA | downstream | 147810 | 11682924 ~ 11683244 (+) | True | G80860 |
| XM_043251321.1 | mRNA | upstream | 1786 | 11525023 ~ 11526933 (+) | False | rpl37a |
| XM_043252192.1 | mRNA | upstream | 5061 | 11512333 ~ 11523658 (+) | True | LOC122354143 |
| XM_043252195.1 | mRNA | upstream | 21002 | 11505653 ~ 11507717 (+) | False | LOC122354145 |
| XM_043252196.1 | mRNA | upstream | 28797 | 11486516 ~ 11499922 (+) | True | orc2 |
| XM_043251850.1 | mRNA | upstream | 43237 | 11470319 ~ 11485482 (+) | True | ldb1b |
| XM_043252522.1 | mRNA | downstream | 4564 | 11539678 ~ 11547713 (+) | True | opn6a |
| XM_043251529.1 | mRNA | downstream | 62676 | 11597790 ~ 11599698 (+) | True | map1lc3c |
| XM_043252117.1 | mRNA | downstream | 163210 | 11698324 ~ 11700214 (+) | True | tomm20b |
| XM_043252113.1 | mRNA | downstream | 170994 | 11706108 ~ 11715351 (+) | True | tbce |
| XM_043252115.1 | mRNA | downstream | 170994 | 11706108 ~ 11715351 (+) | False | tbce |
| TU119512 | other | upstream | 1677 | 11525059 ~ 11527042 (+) | True | rpl37a |
| TU119266 | other | upstream | 20948 | 11505682 ~ 11507771 (+) | False | LOC122354145 |
| TU119267 | other | upstream | 20948 | 11505682 ~ 11507771 (+) | True | LOC122354145 |
| TU119444 | other | upstream | 302097 | 11222347 ~ 11226622 (+) | True | G80761 |
| TU119245 | other | upstream | 866749 | 10641132 ~ 10661970 (+) | True | G80638 |
| TU119538 | other | downstream | 44912 | 11580026 ~ 11672938 (+) | False | LOC122354243 |
| TU119539 | other | downstream | 44912 | 11580026 ~ 11660942 (+) | True | LOC122354243 |
| TU119601 | other | downstream | 163250 | 11698364 ~ 11700214 (+) | False | tomm20b |
| TU120019 | other | downstream | 325828 | 11860942 ~ 11863112 (+) | False | LOC122353892 |
| TU120138 | other | downstream | 657640 | 12192754 ~ 12225492 (+) | False | G81213 |
