RNA id: TU119568


Basic Information

Item Value
RNA id TU119568
length 297
lncRNA type sense_over
GC content 0.44
exon number 2
gene id G80847
representative False

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11736372 ~ 11766054 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacaccaatagCTGCTCATCATCTCAACTATTCCTCCAGAATTAgcagatcatgaaaaggcaGGAGAATGAATGCAGTGGATCTGAAACATCAGCCGTGGGTTTGAGCTAAATATAACAGAGATCAGACGCAGCTCCAGAGTTATTCTTAGAAACAGAGACGTCTTCAAAACCTGAACATCTGATATTTTAAGCCTGCACTGATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119599 lncRNA upstream 47161 11690440 ~ 11694453 (+) True G80865
TU119595 lncRNA upstream 57670 11683460 ~ 11683944 (+) True G80861
TU119594 lncRNA upstream 58370 11682924 ~ 11683244 (+) True G80860
XR_006252094.1 lncRNA upstream 68657 11657886 ~ 11672957 (+) False LOC122354243
TU119535 lncRNA upstream 170183 11571102 ~ 11571431 (+) True G80825
TU119632 lncRNA downstream 7564 11773618 ~ 11814731 (+) True G80887
TU119635 lncRNA downstream 8672 11774726 ~ 11775122 (+) True G80889
TU120014 lncRNA downstream 84991 11851045 ~ 11857319 (+) False shroom2b
TU120141 lncRNA downstream 439114 12205168 ~ 12225492 (+) True G81213
TU120168 lncRNA downstream 469138 12235192 ~ 12236177 (+) True G81234
XM_043252113.1 mRNA upstream 26263 11706108 ~ 11715351 (+) True tbce
XM_043252115.1 mRNA upstream 26263 11706108 ~ 11715351 (+) False tbce
XM_043252114.1 mRNA upstream 26263 11706108 ~ 11715351 (+) False tbce
XM_043252117.1 mRNA upstream 41400 11698324 ~ 11700214 (+) True tomm20b
XM_043251529.1 mRNA upstream 141916 11597790 ~ 11599698 (+) True map1lc3c
XM_043251737.1 mRNA downstream 16605 11782659 ~ 11794097 (+) True si:ch1073-365p7.2
XM_043251738.1 mRNA downstream 16605 11782659 ~ 11786717 (+) False si:ch1073-365p7.2
XM_043251733.1 mRNA downstream 29481 11795535 ~ 11811706 (+) True mfn1b
XM_043251723.1 mRNA downstream 61824 11827878 ~ 11852453 (+) True shroom2b
XM_043251727.1 mRNA downstream 61824 11827878 ~ 11852453 (+) False shroom2b
TU119601 other upstream 41400 11698364 ~ 11700214 (+) False tomm20b
TU119538 other upstream 68676 11580026 ~ 11672938 (+) False LOC122354243
TU119539 other upstream 80672 11580026 ~ 11660942 (+) True LOC122354243
TU119513 other upstream 211978 11528734 ~ 11529636 (+) False eif4a3
TU119512 other upstream 214572 11525059 ~ 11527042 (+) True rpl37a
TU120019 other downstream 94888 11860942 ~ 11863112 (+) False LOC122353892
TU120138 other downstream 426700 12192754 ~ 12225492 (+) False G81213
TU120140 other downstream 440701 12206755 ~ 12225492 (+) False G81213
TU120139 other downstream 444898 12210952 ~ 12225492 (+) False G81213
TU120226 other downstream 816861 12582915 ~ 12585641 (+) True G81268

Expression Profile