RNA id: TU119594


Basic Information

Item Value
RNA id TU119594
length 301
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G80860
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11682924 ~ 11683244 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATCTCACAATTCTTCATTTATATGTCGAAATTCTGAGTTGATTTTATCTCATAATCATGAGTTGATCTCTCGCAATTCGGAGTTGACCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGACCTCTCGCAATTCGGAGTTGACATCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGACCTCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252094.1 lncRNA upstream 9967 11657886 ~ 11672957 (+) False LOC122354243
TU119535 lncRNA upstream 111493 11571102 ~ 11571431 (+) True G80825
TU119526 lncRNA upstream 123877 11556962 ~ 11559047 (+) True G80819
TU119516 lncRNA upstream 127211 11549615 ~ 11555713 (+) True G80814
TU119509 lncRNA upstream 171030 11511474 ~ 11511894 (+) True G80809
TU119595 lncRNA downstream 216 11683460 ~ 11683944 (+) True G80861
TU119599 lncRNA downstream 7196 11690440 ~ 11694453 (+) True G80865
TU119567 lncRNA downstream 53128 11736372 ~ 11766054 (+) False G80847
TU119569 lncRNA downstream 53128 11736372 ~ 11766054 (+) True G80847
TU119568 lncRNA downstream 58370 11741614 ~ 11766054 (+) False G80847
XM_043251529.1 mRNA upstream 83226 11597790 ~ 11599698 (+) True map1lc3c
XM_043252522.1 mRNA upstream 135211 11539678 ~ 11547713 (+) True opn6a
XM_043252731.1 mRNA upstream 147810 11528719 ~ 11535114 (+) True eif4a3
XM_043251321.1 mRNA upstream 155991 11525023 ~ 11526933 (+) False rpl37a
XM_043252192.1 mRNA upstream 159266 11512333 ~ 11523658 (+) True LOC122354143
XM_043252117.1 mRNA downstream 15080 11698324 ~ 11700214 (+) True tomm20b
XM_043252113.1 mRNA downstream 22864 11706108 ~ 11715351 (+) True tbce
XM_043252115.1 mRNA downstream 22864 11706108 ~ 11715351 (+) False tbce
XM_043252114.1 mRNA downstream 22864 11706108 ~ 11715351 (+) False tbce
XM_043251751.1 mRNA downstream 69301 11752545 ~ 12870121 (+) True LOC122353861
TU119538 other upstream 9986 11580026 ~ 11672938 (+) False LOC122354243
TU119539 other upstream 21982 11580026 ~ 11660942 (+) True LOC122354243
TU119513 other upstream 153288 11528734 ~ 11529636 (+) False eif4a3
TU119512 other upstream 155882 11525059 ~ 11527042 (+) True rpl37a
TU119266 other upstream 175153 11505682 ~ 11507771 (+) False LOC122354145
TU119601 other downstream 15120 11698364 ~ 11700214 (+) False tomm20b
TU120019 other downstream 177698 11860942 ~ 11863112 (+) False LOC122353892
TU120138 other downstream 509510 12192754 ~ 12225492 (+) False G81213
TU120140 other downstream 523511 12206755 ~ 12225492 (+) False G81213
TU120139 other downstream 527708 12210952 ~ 12225492 (+) False G81213

Expression Profile