RNA id: TU119904



Basic Information


Item Value
RNA id TU119904
length 222
lncRNA type intronic
GC content 0.36
exon number 2
gene id G81045
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11571157 ~ 11571426 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttctggactataaagcgcacctgcatataaaccgcatccgctctatttaaaaaagttttgcaagccacagatatgtatgtttttagatatttactACAGGAACAGAACgattttgaattgtaaatgtacatgtatgtacCTAAATAGATCCTTTCCTAACCTGTATTTTAACACGGCAGCAACTTTGCTGATTAAAACGGGACAGAGCCAAGAGAAAATAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119881 lncRNA downstream 44105 11525058 ~ 11527052 (-) False G81038
TU119882 lncRNA downstream 44105 11525058 ~ 11527052 (-) True G81038
TU119883 lncRNA downstream 44105 11525058 ~ 11527052 (-) False G81038
TU119878 lncRNA downstream 50355 11520131 ~ 11520802 (-) True G81037
TU119877 lncRNA downstream 51710 11519051 ~ 11519447 (-) True G81036
TU119905 lncRNA upstream 26432 11597858 ~ 11598328 (-) True G81046
TU119910 lncRNA upstream 30486 11601912 ~ 11604254 (-) True G81049
TU119932 lncRNA upstream 59889 11631315 ~ 11768444 (-) False G81057
TU119935 lncRNA upstream 65979 11637405 ~ 11648112 (-) False G81059
TU119936 lncRNA upstream 74396 11645822 ~ 11648112 (-) True G81059
XM_043252193.1 mRNA downstream 66712 11499911 ~ 11504445 (-) True cfap410
XM_043252194.1 mRNA downstream 66712 11500109 ~ 11504445 (-) False cfap410
XM_043251848.1 mRNA downstream 114537 11444822 ~ 11456620 (-) True LOC122353939
XM_043251849.1 mRNA downstream 127588 11434329 ~ 11443569 (-) True ogal
XM_043252895.1 mRNA downstream 153906 11405002 ~ 11417251 (-) True tk1
XM_043252389.1 mRNA upstream 85552 11656978 ~ 11661044 (-) True irf2bp2b
XM_043252116.1 mRNA upstream 129736 11701162 ~ 11705953 (-) True rbm34
XM_043251779.1 mRNA upstream 145836 11717262 ~ 11752522 (-) True LOC122353888
XM_043251741.1 mRNA upstream 195405 11766831 ~ 11780808 (-) False ero1b
XM_043251742.1 mRNA upstream 195405 11766831 ~ 11780293 (-) True ero1b
TU119760 other downstream 151827 11403644 ~ 11419330 (-) True G80956
TU119843 other downstream 176281 11393360 ~ 11394876 (-) False LOC122354635
TU119776 other downstream 285868 11263332 ~ 11285289 (-) True mafgb
XR_006252140.1 other downstream 310037 11251255 ~ 11261120 (-) True si:ch73-100l22.3
TU119670 other downstream 426138 11140914 ~ 11145019 (-) True srsf7b
XR_006252062.1 other upstream 195405 11766831 ~ 11780809 (-) False ero1b
XR_006252156.1 other upstream 329542 11900968 ~ 11901098 (-) True LOC122354705
TU120112 other upstream 502170 12073596 ~ 12074075 (-) True G81192
TU120285 other upstream 874434 12445860 ~ 12447287 (-) True G81318
TU120624 other upstream 1246696 12818122 ~ 13057881 (-) False G81512

Expression Profile