Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU119910 |
| length | 1052 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G81049 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 11601912 ~ 11604254 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0044087 | regulation of cellular component biogenesis | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0051493 | regulation of cytoskeleton organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0033043 | regulation of organelle organization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU119905 | lncRNA | downstream | 3584 | 11597858 ~ 11598328 (-) | True | G81046 |
| TU119771 | lncRNA | downstream | 25143 | 11523212 ~ 11576769 (-) | True | G80961 |
| TU119904 | lncRNA | downstream | 30486 | 11571157 ~ 11571426 (-) | True | G81045 |
| TU119881 | lncRNA | downstream | 74860 | 11525058 ~ 11527052 (-) | False | G81038 |
| TU119882 | lncRNA | downstream | 74860 | 11525058 ~ 11527052 (-) | True | G81038 |
| TU119932 | lncRNA | upstream | 27061 | 11631315 ~ 11768444 (-) | False | G81057 |
| TU119935 | lncRNA | upstream | 33151 | 11637405 ~ 11648112 (-) | False | G81059 |
| TU119936 | lncRNA | upstream | 41568 | 11645822 ~ 11648112 (-) | True | G81059 |
| TU119951 | lncRNA | upstream | 76324 | 11680578 ~ 11685006 (-) | True | G81074 |
| TU119953 | lncRNA | upstream | 76324 | 11680578 ~ 11683244 (-) | False | G81074 |
| XM_043251824.1 | mRNA | downstream | 5538 | 11549599 ~ 11596374 (-) | True | strn |
| XM_043252193.1 | mRNA | downstream | 97467 | 11499911 ~ 11504445 (-) | True | cfap410 |
| XM_043252194.1 | mRNA | downstream | 97467 | 11500109 ~ 11504445 (-) | False | cfap410 |
| XM_043251848.1 | mRNA | downstream | 145292 | 11444822 ~ 11456620 (-) | True | LOC122353939 |
| XM_043251849.1 | mRNA | downstream | 158343 | 11434329 ~ 11443569 (-) | True | ogal |
| XM_043252389.1 | mRNA | upstream | 52724 | 11656978 ~ 11661044 (-) | True | irf2bp2b |
| XM_043252116.1 | mRNA | upstream | 96908 | 11701162 ~ 11705953 (-) | True | rbm34 |
| XM_043251779.1 | mRNA | upstream | 113008 | 11717262 ~ 11752522 (-) | True | LOC122353888 |
| XM_043251741.1 | mRNA | upstream | 162577 | 11766831 ~ 11780808 (-) | False | ero1b |
| XM_043251742.1 | mRNA | upstream | 162577 | 11766831 ~ 11780293 (-) | True | ero1b |
| TU119760 | other | downstream | 182582 | 11403644 ~ 11419330 (-) | True | G80956 |
| TU119843 | other | downstream | 207036 | 11393360 ~ 11394876 (-) | False | LOC122354635 |
| TU119776 | other | downstream | 316623 | 11263332 ~ 11285289 (-) | True | mafgb |
| XR_006252140.1 | other | downstream | 340792 | 11251255 ~ 11261120 (-) | True | si:ch73-100l22.3 |
| TU119670 | other | downstream | 456893 | 11140914 ~ 11145019 (-) | True | srsf7b |
| XR_006252062.1 | other | upstream | 162577 | 11766831 ~ 11780809 (-) | False | ero1b |
| XR_006252156.1 | other | upstream | 296714 | 11900968 ~ 11901098 (-) | True | LOC122354705 |
| TU120112 | other | upstream | 469342 | 12073596 ~ 12074075 (-) | True | G81192 |
| TU120285 | other | upstream | 841606 | 12445860 ~ 12447287 (-) | True | G81318 |
| TU120624 | other | upstream | 1213868 | 12818122 ~ 13057881 (-) | False | G81512 |
