RNA id: TU120064



Basic Information


Item Value
RNA id TU120064
length 974
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G81158
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11875488 ~ 11877649 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACGTTGCGCATAAACATAACGCCTTGACTGCATTTATGATCAGAGATGACAAAAACGCACTACTCTGAACAGTAAGTATCAGATTCTGTGTATAATAAAACGCAAAACAGCAATAGTTGGGAATTGCCCCACTTTTATAGCTTTTGTGCATTGCTATGCTAACATGTTCGTCCGTAAATGTGCTGAACGCACTCTATTATTTGTGTTCATCTGCTCTGGAGCGGTGTTTTAAACGCAACTTGGAAATCGTGTCCGATTTTGGAAACACTAAGTAGTTTCACTCTCACGACGGAAAAcgcagcgtctccagaacatggcgcccgcagcaacgcTACACACAGAATAATAGCTTTCTCACCCAAACACGCGGCGGCTCCGACCATGGCGTACAGCCCCGGAGTGACGCAATCGGCTCCTGGGCGACACCAGTTCTTAAAGATGATCCAATGGTGATGACGATCTTGAAGACGAGCGCCAGCGCGAGCTGCCAGAGGGCGCTGTAGACCCCGGGGCCGGCGGGTCTGTCGGGGATGTCGTCCACGGGCCGGGTCATGTTGGGGTTGTTGATGTAGTCACAGAGCTGCGACGACTCGAGCGCCCCGCAGTCGTTGAACAGCTCTGAGATCAGCTCGCTGGTGCTGCGGCGGGTGTAAGGGTTGGGGAAGGCCAGAACGGCAGTGATCCCCGTCACCACGATCACCTCCAGCACCGGGTACTTGCCCAGCCGCGTGGTCTTGCGCCGCCGGCACCAGGCGATGTTGCAGCGGATGAAGAGCGTCCCCCAGAGGCCCCCGAACACACCCAGCAGGATGAAGGGCACCAGCTCGGCCATGTACCACGGCGTGTGATACTCCACATAAAACAGAACCAGGCGATTGTTGCCGAACGGGTTGATGGAGCGCAGCGTGAAGGCCGCCACCAGCGCCGCGAAGAAAGACCGCCATAACGTCTTCAGAGGGAAGTAATAACTCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119981 lncRNA downstream 88500 11784280 ~ 11786988 (-) True G81097
TU119931 lncRNA downstream 107044 11736379 ~ 11768444 (-) True G81057
TU119933 lncRNA downstream 109417 11736379 ~ 11766071 (-) False G81057
TU119976 lncRNA downstream 116081 11755624 ~ 11759407 (-) True G81093
TU119977 lncRNA downstream 116081 11758737 ~ 11759407 (-) False G81093
TU120083 lncRNA upstream 21222 11898871 ~ 11955070 (-) True G81165
TU120089 lncRNA upstream 56416 11934065 ~ 11938428 (-) True G81171
TU120092 lncRNA upstream 61633 11939282 ~ 11940885 (-) True G81174
TU120166 lncRNA upstream 356750 12234399 ~ 12234936 (-) True G81233
TU120169 lncRNA upstream 357953 12235602 ~ 12236175 (-) True G81235
XM_043251762.1 mRNA downstream 16333 11856339 ~ 11859155 (-) True LOC122353870
XM_043251754.1 mRNA downstream 52697 11812570 ~ 11822791 (-) True gnb4b
XM_043251741.1 mRNA downstream 94680 11766831 ~ 11780808 (-) False ero1b
XM_043251742.1 mRNA downstream 95195 11766831 ~ 11780293 (-) True ero1b
XM_043251779.1 mRNA downstream 122966 11717262 ~ 11752522 (-) True LOC122353888
XM_043251753.1 mRNA upstream 6909 11884558 ~ 11892192 (-) False traf3ip2b
XM_043251752.1 mRNA upstream 6909 11884558 ~ 11892190 (-) True traf3ip2b
XM_043251728.1 mRNA upstream 104787 11982436 ~ 12059316 (-) True gli2b
XM_043251750.1 mRNA upstream 273087 12150736 ~ 12161843 (-) True LOC122353860
XM_043251771.1 mRNA upstream 291819 12169468 ~ 12171898 (-) True LOC122353880
XR_006252062.1 other downstream 94679 11766831 ~ 11780809 (-) False ero1b
TU119760 other downstream 456158 11403644 ~ 11419330 (-) True G80956
TU119843 other downstream 480612 11393360 ~ 11394876 (-) False LOC122354635
TU119776 other downstream 590199 11263332 ~ 11285289 (-) True mafgb
XR_006252140.1 other downstream 614368 11251255 ~ 11261120 (-) True si:ch73-100l22.3
XR_006252156.1 other upstream 23319 11900968 ~ 11901098 (-) True LOC122354705
TU120112 other upstream 195947 12073596 ~ 12074075 (-) True G81192
TU120285 other upstream 568211 12445860 ~ 12447287 (-) True G81318
TU120624 other upstream 940473 12818122 ~ 13057881 (-) False G81512
TU120651 other upstream 1012632 12890281 ~ 12896130 (-) False G81523

Expression Profile