RNA id: TU121177



Basic Information


Item Value
RNA id TU121177
length 399
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G81872
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14484503 ~ 14484901 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCGTCCAGGGTGACTCTCAGTGCCAGTTTGGTCATGCCATCCTCCTTCAGCAGACAGAGAGACTGACACAGTGCCAGGCAGAACGCCCGCGCGAGACGCTCCGTCAGACGGTTATGGCTGGTGTGGTTATTAAGACCATTTGGATGTTGATCTTTCAGCAAGTAAAACACCTGTGAAGTAATTCACACCAGAATTAAGCATAAATAagcataaatcaaaataaaggcATTAAAACGGTGCTCTATGTACTCTATTTTCCTTCTTTTACCTCTATTCAACTCTGATTTTACTCTAAAATAAGGCAGTGCTGAGGATCagataaaaaattgtaatataattagttctgtcaaaagattaatagCGTAACATAACATATTATATGCgagtgttctgtgtata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121182 lncRNA downstream 572 14483496 ~ 14483931 (-) True G81877
TU121181 lncRNA downstream 1072 14483019 ~ 14483431 (-) True G81876
TU121180 lncRNA downstream 1924 14482160 ~ 14482579 (-) True G81875
TU121179 lncRNA downstream 5074 14479197 ~ 14479429 (-) True G81874
TU121178 lncRNA downstream 5392 14478510 ~ 14479111 (-) True G81873
TU121197 lncRNA upstream 41212 14526113 ~ 14527527 (-) True G81882
TU121198 lncRNA upstream 43729 14528630 ~ 14529449 (-) True G81883
TU121199 lncRNA upstream 45724 14530625 ~ 14531429 (-) True G81884
TU121206 lncRNA upstream 56859 14541760 ~ 14544078 (-) True G81890
TU121207 lncRNA upstream 56859 14541760 ~ 14544078 (-) False G81890
XM_043251518.1 mRNA downstream 32763 14443323 ~ 14451740 (-) False chrna4b
XM_043252080.1 mRNA downstream 93059 14382027 ~ 14391444 (-) False txlng
XM_043252081.1 mRNA downstream 93264 14382027 ~ 14391239 (-) True txlng
XM_043252082.1 mRNA downstream 93441 14382027 ~ 14391062 (-) False txlng
XM_043252458.1 mRNA downstream 111022 14367171 ~ 14373481 (-) True zrsr2
XM_043251912.1 mRNA upstream 3476 14488377 ~ 14511622 (-) False elovl1b
XM_043251910.1 mRNA upstream 3476 14488377 ~ 14511540 (-) False elovl1b
XM_043251915.1 mRNA upstream 3476 14488377 ~ 14511219 (-) False elovl1b
XM_043251911.1 mRNA upstream 3476 14488377 ~ 14493822 (-) False elovl1b
XM_043251914.1 mRNA upstream 3476 14488377 ~ 14493796 (-) True elovl1b
XR_006252040.1 other downstream 32763 14442601 ~ 14451740 (-) True chrna4b
TU121063 other downstream 557023 13856300 ~ 13927480 (-) False G81799
TU121103 other downstream 597238 13885683 ~ 13887265 (-) True G81829
TU120846 other downstream 784545 13698099 ~ 13699958 (-) True G81650
TU120873 other downstream 874899 13606497 ~ 13609604 (-) False G81666
TU121170 other upstream 49817 14534718 ~ 14536392 (-) True G81866
TU121492 other upstream 720060 15204961 ~ 15214058 (-) True G82067
TU121487 other upstream 749587 15234488 ~ 15235056 (-) False LOC122354561
TU121711 other upstream 916017 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 3052602 17537503 ~ 17540171 (-) False G82585

Expression Profile