RNA id: TU121206


Basic Information

Item Value
RNA id TU121206
length 2231
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G81890
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14541760 ~ 14544078 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aacaacagacatCGGTCTTTTTAAGGATGTCAATGCCGCAAGCTACTGGTTTTGGGAGATGTGGGGGTTCTTACTCGATCTATGGTCTCAAAGATAATGGTGGCAGCTCCTCTTCCAGCAGCAAAAGCCTCCAGACAAGGAGAGGCCTGGCCCAGATTCAAAGCGGCAATGAGCACTCCAAAAAACCACCTGCAGCAATGTCCCTGGACTGTACTCCTGTGTGTCCACTACTAGGCTTGATCCATACCAGAAGGCCAGTGCATAACACAGGAAGatgataaaccacaaatacccaGTGAAAAAGCCCATGATCAGACCTTTCCTGATGCCCCATCGCTGGGCAGAGATCAGATTACGGTCGTACCTGCAGGGTTCGGGGGTTAAATGATGGTATAACGCACACTCAGCAGTGATTACAGTGTAGTGTGGGAGTCATTATGCGTGAAGATGATGGTTACCTCTGCACCTCTTTCTTCTCACCGCCGAATGCTGCCACCGTGCGTACCGAGGATAAAACCTCATCGGCCACGGCACCTGCTTTAGCGTACGCCTGCAGCTCCATTCCCGTCAGCTTTGCCACAAACTAGACCGGCGCATGCAAGCAAAACAAGTGGTAACCTATGCTAATTAAAGGGGTAGTTCGccccaaaaataaacactttgtcatcgttccaaacctgtatgaatttctctTGTAAgttgagcacaaaagaagatatttagaagaatgttggtaaccaaaaaCTTGTTTATCCCCGTTGaacaaaaatactatggaaatcGGTGGGGACGAGAAacggttaccaacattcttaaaggaatagttcacctaaaaatgaaatgaaattaatgtCTTTTGAAACAGACTGATGGGGTTTTGTAACAcgaaatatttctagttttcaaattataccgtaaataactgacttccgGCTTCTTGGCCTGCTTCTGACTCGACATACGGCGTTAGAAGTAAGTTGCGTCATACGGCGAGTCAAAGGTCAGCCAAAAAGCCAGAACTCTGTGCTTTACCTTTGCAGTACTTGGGGTTATATCctatttatggagcttcaaagtAATGGTCGCTATCCACCTGCATTACCAAGCATGgaaggatctttttttttaaaactcagactgtgGTCGTAAGAacgaagaaagtcatatacacctaagatggcttgggagtgagtaaaatatgccgcaatttaaatttttgggtgaactactcctttaagaaTGTTGGTAACAAAACCGCTTCTCAAAACTCGTCCCCATTGATTGCCATGGTATTTTCTTCACCACAAATTATCTTGGAAGAAGAGAAAAATTattcaggtttgaaacaactaGGGTGTGTAATAAATCACAATCAGTTGGATTGCTTGTAACGTTATCCCTTTAAATTGAATAACTCCTTTCTGATCATAAAGATAGCTTAAATTCGGCATAGCAGCACCTTTATAGTGCGCTTTAGCATAGTTAAGCTATTATTCTTGCTAAGTAATATGCTGAAATAATGACAGctctttttcacttttgatGTTGTGCATATATAAAACTGTACACTGTTTAGCTCTctaaactcttaaaaataaaggtatttcACAGTGCCCTAGAAGAACCTATTTTGTCttaatggttccataaagacaGGCTAACATCTGGAGAACATTTCAGGTTTTTTGTGCTACTTCAGATtataaaatggttctttaaTGAGGAAACTTAGCGGAATCAAAGATGTTTCTTCTAcggcatcgctgtgaagaaccttttaagcgcctttatttttaagagtgtacctATGTAGCCTGACGAATGGTCCTTTCTCACCAGAGCCATGAGACCTGCTCCGACCCCAATGAGAGGAGACACCGAGATGATGACCAGCGTTAGCTTCCAGCCCCTGGCAAAACCCATCAGGAAGCCGCACACAAATGTAGTAAAGCGCTGGATGAAGATGCCCACCTGATCAGCAATGGCGTCGTTTATCTTGTTGATGTCACTAGGGTCACATGGAGTCGCACAGGAGTCAGTACAATATTAGGTAACTTGTGTTCGCCTGGGGTGTTTGTGCTCTGGAACGTGTCGTACTCGGACATGCGTGTGTTGAGCTCTCCCACAGAGGTGCAGTCAAACCATCCGATCTCCATCCTCATGACCTTCCTAAAATACATCTTCCTGATGATCTGAATCTGACGTGCTGCTGAAGTGATCCACAAAGAAAT

Function

GO:

id name namespace
GO:0048732 gland development biological_process
GO:0061008 hepaticobiliary system development biological_process
GO:0001889 liver development biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121199 lncRNA downstream 10331 14530625 ~ 14531429 (-) True G81884
TU121198 lncRNA downstream 12311 14528630 ~ 14529449 (-) True G81883
TU121197 lncRNA downstream 14233 14526113 ~ 14527527 (-) True G81882
TU121177 lncRNA downstream 56859 14484503 ~ 14484901 (-) True G81872
TU121182 lncRNA downstream 57829 14483496 ~ 14483931 (-) True G81877
TU121205 lncRNA upstream 1029 14545107 ~ 14545703 (-) True G81889
XR_006252041.1 lncRNA upstream 93046 14637124 ~ 14643541 (-) True LOC122353646
TU121253 lncRNA upstream 115631 14659709 ~ 14661280 (-) True G81920
TU121296 lncRNA upstream 254648 14798726 ~ 14799026 (-) True G81954
XR_006252092.1 lncRNA upstream 263025 14807103 ~ 14809969 (-) True LOC122354194
XM_043251912.1 mRNA downstream 30138 14488377 ~ 14511622 (-) False elovl1b
XM_043251910.1 mRNA downstream 30220 14488377 ~ 14511540 (-) False elovl1b
XM_043251915.1 mRNA downstream 30541 14488377 ~ 14511219 (-) False elovl1b
XM_043251911.1 mRNA downstream 47938 14488377 ~ 14493822 (-) False elovl1b
XM_043251914.1 mRNA downstream 47964 14488377 ~ 14493796 (-) True elovl1b
XM_043252324.1 mRNA upstream 15823 14559901 ~ 14589170 (-) False mast3b
XM_043252323.1 mRNA upstream 15823 14559901 ~ 14589170 (-) False mast3b
XM_043252320.1 mRNA upstream 15823 14559901 ~ 14589170 (-) False mast3b
XM_043252319.1 mRNA upstream 15823 14559901 ~ 14589170 (-) True mast3b
XM_043252322.1 mRNA upstream 15823 14559901 ~ 14583566 (-) False mast3b
TU121170 other downstream 5368 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 90020 14442601 ~ 14451740 (-) True chrna4b
TU121063 other downstream 614280 13856300 ~ 13927480 (-) False G81799
TU121103 other downstream 654495 13885683 ~ 13887265 (-) True G81829
TU120846 other downstream 841802 13698099 ~ 13699958 (-) True G81650
TU121492 other upstream 660883 15204961 ~ 15214058 (-) True G82067
TU121487 other upstream 690410 15234488 ~ 15235056 (-) False LOC122354561
TU121711 other upstream 856840 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 2993425 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2994305 17538383 ~ 17540171 (-) True G82585

Expression Profile