RNA id: TU121449


Basic Information

Item Value
RNA id TU121449
length 1655
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G82037
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15111001 ~ 15112738 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCTGCGCCTGGTGATGAACGGGTCCTCCGAATCGACGGGACTGAGTGTGGTACAGCTGAGAGATCAGCTGGGAATTCTTGGTCTGGTTTGGATTGGCAGCAAACTTCACTGTGATTGGTTCAGAGGCACCAGCTGGTTTGGATCCATTAAGATCCTTGATGGCTTCCTCCGCTTCAGACCTCTTATCGAAACGGATAAATGCAACTCCACGAGACAGACTACCCGAGGCCTGATCGACCAATACGCGGGAGTTTATAATATGCCCGTACTGGGTAAACATGTCCTCTACATCCTTCTGTGTCATAGTCTTGGGTAAACCGCTGATGTACAGGTTGGCATCTTTGATGCTGTCAGAGCTTGGCCGGGCATATGAGACCTAATTTAATAGAGAAATATCGCATTAAAAACCACTTCATTAaggcattgtttttaaaaaaaaaacaaaaaaagtcatgtttgcCCCCATTACTGATGAAACAATATAGTTCCATTGTGTAACCAAAGCATATTCTCACagattaacaaacaaaaaatttaaaacaaatcccaacaaaattaaaacctaaacaacaaccaaaaaaaagctACAATGATATCGTTTACTTCATATAGGTATAAAACAGTTTatacacatacacgcacacacaacaaaaacagacaaatttCAATTTGAATTCAAACTACAATgctcaaaagtaaaaaaataaataaaattaaaaaaataattccaataataaataaaatttaaaataaaaatgtctgggATTTCAGCACAGGGCTTCTGTTCGGCACAATTTCATACTCAAGCCTCGGTTTTTACACCACAACCACGCAAGAGAAATGGAAATAGCAtattttcatcttaaaaaaagaactccAAAATAAAGTCACTGACTTCAGTATAATTCTGTACCGAAATTAAACCATGCTTAATCAAAGGCAGCCAATCATACAGATAAGAGCAAAAATCTTGAGACATCAAATgtcaggaaaaaataaaaataaaacaaaaaaaaaaaaaggaacaattGTTGAAACTCATGAAGTTGTTCATTCCTTATAGAAAGCAGGCAGGACTGGAACGCTGTCCTAACTGCTTTGATGCTAGTTACCAATATGGCATCTATAATTTTAACACATGGATACAAAAACACCTCTTTGCACGTTACCTTGATAGTTTTAGACTGTAGTCTCAGGCCATTGAGTGTATTGATTGCCCTTTCTGCATCACTAGGGTTAACATAGTTAACAAATCCGTACCCTAAACTGTGGCCTAGAGAAAACAaaagggaaaacaaacaaaataaaaataacaaacgtTCGTCCACATCCTGCAGACTATTCTCTCTGCATAAAAGAAACAATGCAAGCTGTTCTTGTGAATGAcaattgtaaaacaaaatagttaCACGTTCATCAAAAACAAAGCTTGACATCAGGCAAGAAAACGGTTAGGATACAGAAATCTAATCCAAACATCAAAAAAAGTCTTCATAAAATAGTCTCTAGGAAAAACCCCCGAAAACAATACCTTCCTTCAcctccttaaaaataaaaacaaaaacattagtaggcatttataaatgtttaggtaaataaaatacaatgtacatTCAACATAACTATACATCATATGTCTAAGTATAATGAATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121458 lncRNA downstream 4117 15105914 ~ 15106884 (-) True G82044
TU121395 lncRNA downstream 51465 15059204 ~ 15059536 (-) True G82009
XR_006252121.1 lncRNA downstream 203506 14894364 ~ 14907495 (-) True LOC122354533
TU121366 lncRNA downstream 218751 14838651 ~ 14892250 (-) True G81984
TU121470 lncRNA upstream 52667 15165405 ~ 15165605 (-) True G82053
XR_006252124.1 lncRNA upstream 95582 15208320 ~ 15208834 (-) True LOC122354566
TU121666 lncRNA upstream 176910 15289648 ~ 15291976 (-) True G82173
TU121669 lncRNA upstream 185178 15297916 ~ 15298875 (-) True G82176
TU121671 lncRNA upstream 187688 15300426 ~ 15301171 (-) True G82178
XM_043252384.1 mRNA downstream 312906 14789168 ~ 14798095 (-) False tmem259
XM_043252383.1 mRNA downstream 312906 14789168 ~ 14798095 (-) True tmem259
XM_043252864.1 mRNA downstream 456481 14653436 ~ 14654520 (-) True sid1
XM_043252602.1 mRNA downstream 457879 14651265 ~ 14653122 (-) True si:ch211-1a19.2
XM_043252321.1 mRNA downstream 527435 14559901 ~ 14583566 (-) False mast3b
XM_043251580.1 mRNA upstream 3034 15115772 ~ 15126504 (-) True slc1a8a
XM_043251591.1 mRNA upstream 13904 15126642 ~ 15131592 (-) True LOC122353710
XM_043251590.1 mRNA upstream 19587 15132325 ~ 15138312 (-) True sgta
XM_043252648.1 mRNA upstream 60003 15172741 ~ 15175386 (-) True LOC122354454
XM_043251646.1 mRNA upstream 85064 15197802 ~ 15200640 (-) True LOC122353766
TU121170 other downstream 574609 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 659261 14442601 ~ 14451740 (-) True chrna4b
TU121063 other downstream 1183521 13856300 ~ 13927480 (-) False G81799
TU121103 other downstream 1223736 13885683 ~ 13887265 (-) True G81829
TU120846 other downstream 1411043 13698099 ~ 13699958 (-) True G81650
TU121492 other upstream 92223 15204961 ~ 15214058 (-) True G82067
TU121487 other upstream 121750 15234488 ~ 15235056 (-) False LOC122354561
TU121711 other upstream 288180 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 2424765 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2425645 17538383 ~ 17540171 (-) True G82585

Expression Profile