RNA id: TU121671



Basic Information


Item Value
RNA id TU121671
length 746
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G82178
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15300426 ~ 15301171 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAATAATGTTGTCGGCTGTGGTCTCTATTAGCAAGGCTTCAACCTGTTCAGCTACAGGTGGTGGTGAGGCGGGTTGAGGGGTCGGAATGGGTGGGGCTATAGCCACCTGTCTCTTCCTGCCTCTCTTACCCTTCACTGGAGCAGCAGCAGTCTCTGTAACAACCTGCGCTCCTCCCACCTCGCCCGTACTAACATTGAGTGGGAGCGTGAGTCCACCGGGGAGCCGTACAACATTAGCGTTCACGCCGGCATTGTTCTGCCGCCGTTTCTGAGAAGACGGCTTGATTGCCACCGTCTTCTGCTGGGGGGCCGGGGCCAGAGGTTGCGGAGCCGCCGTGGCAGTCTGAACTGTGACGGGTGAGGTGATAATGGCCTGGTTGGTTCCGGGGATGATCTGGATCTGTCCTCCCTGAGGCATCATTTGAATGGTCTGAGAGCCCTGGAACTGAGGAATCACTTGGTACTGGATGTTGGCAGTGGATGTGCCTGCTGGACGTGAAGGGCTCTGAATAGTGAAGACGATCGGGCTGGCCCCTGATGAACCCAGTCCCGCGGGCAGCTGGATAACATTTCCCTTCGCTGAGAGGAATCCGAGGTTTTTGGGTGGAGCCGGAGCAATAGGGGCGGGCTTGATGGGGTGCAGGCGGCGAGTGGTTGGCTGAGACGGTGGAGTGCTGACTGGAGCCTGGGCGGCCGGAGGCCCGATCTTACTGCAGGTAGCCGCCAGAAGCGCCAACGGGGAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121669 lncRNA downstream 1551 15297916 ~ 15298875 (-) True G82176
TU121666 lncRNA downstream 8450 15289648 ~ 15291976 (-) True G82173
XR_006252124.1 lncRNA downstream 91592 15208320 ~ 15208834 (-) True LOC122354566
TU121470 lncRNA downstream 134821 15165405 ~ 15165605 (-) True G82053
TU121449 lncRNA downstream 187688 15111001 ~ 15112738 (-) True G82037
TU121670 lncRNA upstream 896 15302067 ~ 15302341 (-) True G82177
TU121647 lncRNA upstream 2474 15303645 ~ 15305613 (-) True G82162
TU121674 lncRNA upstream 12774 15313945 ~ 15314480 (-) True G82181
XR_006252125.1 lncRNA upstream 16321 15317492 ~ 15318686 (-) False LOC122354567
TU121680 lncRNA upstream 16723 15317894 ~ 15320131 (-) True LOC122354567
XM_043252784.1 mRNA downstream 17582 15267975 ~ 15282844 (-) False gpr179
XM_043252782.1 mRNA downstream 17582 15267975 ~ 15282844 (-) False gpr179
XM_043252783.1 mRNA downstream 17582 15267975 ~ 15282844 (-) True gpr179
XM_043251649.1 mRNA downstream 54726 15242488 ~ 15245700 (-) True LOC122353770
XM_043252799.1 mRNA downstream 64990 15233933 ~ 15235436 (-) True LOC122354561
XM_043252792.1 mRNA upstream 48567 15349738 ~ 15371682 (-) True jupa
XM_043252801.1 mRNA upstream 99747 15400918 ~ 15401685 (-) False LOC122354564
XM_043252260.1 mRNA upstream 121981 15423152 ~ 15430070 (-) True krt98
XM_043252098.1 mRNA upstream 166799 15467970 ~ 15474238 (-) True hyls1
XM_043252100.1 mRNA upstream 188449 15489620 ~ 15493617 (-) False ptp4a1
TU121487 other downstream 65370 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 86368 15204961 ~ 15214058 (-) True G82067
TU121170 other downstream 764034 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 848686 14442601 ~ 14451740 (-) True chrna4b
TU121103 other downstream 1413161 13885683 ~ 13887265 (-) True G81829
TU121711 other upstream 99747 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 2236332 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2237212 17538383 ~ 17540171 (-) True G82585
TU122326 other upstream 2249410 17550581 ~ 17559836 (-) True G82588
TU122328 other upstream 2272431 17573602 ~ 17576984 (-) True G82590

Expression Profile