RNA id: XM_043252801.1



Basic Information


Item Value
RNA id XM_043252801.1
length 393
RNA type mRNA
GC content 0.50
exon number 3
gene id LOC122354564
representative False

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15400918 ~ 15401691 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TACACTGCTTTCTGGCTCAGCACTATTCAGaaatgaTGGCCAAGTGTGTTGTATTGACCGCTATAGCGATGCTGGCGGTGGCATGTGTGGCCTCTCCTCTGTCCAAAGACGCTCCTGCGAACAGAAAGGCGACGGAACGGCTTCTGAAGAGACCACCGGAGACACCGGAGAGGCTGTCCCGTGCCAGTCGTTCCGCGCATTTACCGGAGGATCAGCGAGAGCTCATGTCCCGCCAGCTCTTACAAGCACTGTCAGAAATCATGCAGCGGGAGGACTGCGTTACAGATTATCAAGGCTGGGTAGATTTTGGTCGTCGGAGTACAGACTGAGAATTAAACTCTGTAACgttactgtgatttttttttgtcattaaatataCTTGCAACTAGCCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121695 lncRNA downstream 58500 15337927 ~ 15342418 (-) True G82190
TU121692 lncRNA downstream 65095 15335006 ~ 15335823 (-) True G82189
TU121684 lncRNA downstream 68849 15331657 ~ 15332069 (-) True G82187
TU121680 lncRNA downstream 80787 15317894 ~ 15320131 (-) True LOC122354567
XR_006252125.1 lncRNA downstream 82232 15317492 ~ 15318686 (-) False LOC122354567
TU121644 lncRNA upstream 19120 15420805 ~ 15446837 (-) True G82160
TU121643 lncRNA upstream 38819 15440504 ~ 15446837 (-) False G82160
TU121718 lncRNA upstream 42837 15444522 ~ 15450399 (-) True G82211
TU121729 lncRNA upstream 69621 15471306 ~ 15471689 (-) True G82216
TU121725 lncRNA upstream 95965 15497650 ~ 15498104 (-) True G82214
XM_043252792.1 mRNA downstream 29236 15349738 ~ 15371682 (-) True jupa
XM_043252784.1 mRNA downstream 118074 15267975 ~ 15282844 (-) False gpr179
XM_043252782.1 mRNA downstream 118074 15267975 ~ 15282844 (-) False gpr179
XM_043252783.1 mRNA downstream 118074 15267975 ~ 15282844 (-) True gpr179
XM_043251649.1 mRNA downstream 155218 15242488 ~ 15245700 (-) True LOC122353770
XM_043252260.1 mRNA upstream 21467 15423152 ~ 15430070 (-) True krt98
XM_043252098.1 mRNA upstream 66285 15467970 ~ 15474238 (-) True hyls1
XM_043252100.1 mRNA upstream 87935 15489620 ~ 15493617 (-) False ptp4a1
XM_043252101.1 mRNA upstream 87935 15489620 ~ 15493617 (-) True ptp4a1
XM_043252257.1 mRNA upstream 97429 15499114 ~ 15521716 (-) True myom2a
TU121487 other downstream 165862 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 186860 15204961 ~ 15214058 (-) True G82067
TU121170 other downstream 864526 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 949178 14442601 ~ 14451740 (-) True chrna4b
TU121103 other downstream 1513653 13885683 ~ 13887265 (-) True G81829
TU122317 other upstream 2135818 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2136698 17538383 ~ 17540171 (-) True G82585
TU122326 other upstream 2148896 17550581 ~ 17559836 (-) True G82588
TU122328 other upstream 2171917 17573602 ~ 17576984 (-) True G82590
XR_006252134.1 other upstream 2233121 17634806 ~ 17635665 (-) False LOC122354622

Expression Profile