RNA id: TU121729



Basic Information


Item Value
RNA id TU121729
length 267
lncRNA type intronic
GC content 0.41
exon number 2
gene id G82216
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15471306 ~ 15471689 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAGAGAGGAAGATGAAGAATGTAGAGAGgaggaggaagaaagtgaagaggaggaagatgaagaaaatgaagaggaggagaaaggaaaagaaagtgTAGAGGAAGAAGGAAGTCAAGATGAGAAAGAAAAGTTGTGTGAACAACAGACGGGAAATGAAAAGGAGGAAGTGGAGgacaaggaaaaggaaaaagaattTGAAGAGGAACAGGAGAAAGAGAATAAATGGAAAGAGGAAGAGTCAGAAGAAagtgaggaggaagaggacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121718 lncRNA downstream 20907 15444522 ~ 15450399 (-) True G82211
TU121644 lncRNA downstream 24469 15420805 ~ 15446837 (-) True G82160
TU121643 lncRNA downstream 24469 15440504 ~ 15446837 (-) False G82160
TU121695 lncRNA downstream 128888 15337927 ~ 15342418 (-) True G82190
TU121692 lncRNA downstream 135483 15335006 ~ 15335823 (-) True G82189
TU121725 lncRNA upstream 25961 15497650 ~ 15498104 (-) True G82214
TU121779 lncRNA upstream 80704 15552393 ~ 15553027 (-) False pla2r1
TU121778 lncRNA upstream 80825 15552514 ~ 15553027 (-) False pla2r1
TU121823 lncRNA upstream 124366 15596055 ~ 15596408 (-) False LOC122354045
TU121822 lncRNA upstream 141457 15613146 ~ 15613851 (-) True G82260
XM_043252260.1 mRNA downstream 41236 15423152 ~ 15430070 (-) True krt98
XM_043252801.1 mRNA downstream 69621 15400918 ~ 15401685 (-) False LOC122354564
XM_043252792.1 mRNA downstream 99624 15349738 ~ 15371682 (-) True jupa
XM_043252782.1 mRNA downstream 188462 15267975 ~ 15282844 (-) False gpr179
XM_043252100.1 mRNA upstream 17931 15489620 ~ 15493617 (-) False ptp4a1
XM_043252101.1 mRNA upstream 17931 15489620 ~ 15493617 (-) True ptp4a1
XM_043252257.1 mRNA upstream 27425 15499114 ~ 15521716 (-) True myom2a
XM_043252022.1 mRNA upstream 51654 15523343 ~ 15550688 (-) False ly75
XM_043252021.1 mRNA upstream 51654 15523343 ~ 15550688 (-) False ly75
TU121711 other downstream 69615 15400918 ~ 15401691 (-) True LOC122354564
TU121487 other downstream 236250 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 257248 15204961 ~ 15214058 (-) True G82067
TU121170 other downstream 934914 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 1019566 14442601 ~ 14451740 (-) True chrna4b
TU122317 other upstream 2065814 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2066694 17538383 ~ 17540171 (-) True G82585
TU122326 other upstream 2078892 17550581 ~ 17559836 (-) True G82588
TU122328 other upstream 2101913 17573602 ~ 17576984 (-) True G82590
XR_006252134.1 other upstream 2163117 17634806 ~ 17635665 (-) False LOC122354622

Expression Profile