RNA id: TU122317



Basic Information


Item Value
RNA id TU122317
length 393
RNA type TUCP
GC content 0.51
exon number 4
gene id G82585
representative False

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 17537503 ~ 17540171 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAAGAGCAGCAGCGTGGACAGCTTGGACATGTTCGATGACGACCAGGACCACCTAGAAGCTTGCTTTAAGGACTCCGATTACGtttATCCATCTCTGGAATCTGAGGAGGACAGTCCCATTTTCAAATCAAGAtcgaaaaaaaggaaaaatacagACGACACTCCATATAGTCCAACAGCACGAGTTGGGCCCACTGTACCACGACAGGAGAGACCAGCTCGGGAGGGGGCACGTGTGGCGTCCATAGAGACAGGATTGGCAGCTGCGGCCGCTAAACTGTCTCATCAGGAGGAGCAGAAGatcaagaagaagaaaagagtaCAAAAAGAAGCCCGTGGCTGTAGAGGAGCCTCACAAACTCTCTCAGGACAGCAGCTCTCCAGAACCCACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252055.1 lncRNA downstream 61492 17465158 ~ 17476011 (-) True LOC122353733
TU122308 lncRNA downstream 89822 17447159 ~ 17447681 (-) True G82578
TU122159 lncRNA downstream 538637 16998661 ~ 16998866 (-) True G82496
TU122097 lncRNA downstream 624929 16906338 ~ 16912574 (-) False LOC122354244
TU122099 lncRNA downstream 631336 16778920 ~ 16906167 (-) False LOC122354244
TU122305 lncRNA upstream 21970 17562141 ~ 17563010 (-) True G82577
TU122354 lncRNA upstream 94632 17634803 ~ 17642527 (-) True G82606
TU122356 lncRNA upstream 95208 17635379 ~ 17642527 (-) False G82606
XR_006252135.1 lncRNA upstream 100865 17641036 ~ 17642527 (-) True LOC122354623
TU122371 lncRNA upstream 153748 17693919 ~ 17694508 (-) True G82619
XM_043251424.1 mRNA downstream 82729 17449267 ~ 17454774 (-) True LOC122353607
XM_043251678.1 mRNA downstream 353384 17096321 ~ 17184119 (-) True suclg2
XM_043252092.1 mRNA downstream 545233 16958903 ~ 16992270 (-) True lrig1
XM_043251397.1 mRNA downstream 645571 16889590 ~ 16891932 (-) True LOC122353589
XM_043252390.1 mRNA downstream 747793 16778912 ~ 16789710 (-) False LOC122354244
XM_043251657.1 mRNA upstream 38154 17578325 ~ 17590223 (-) True LOC122353782
XM_043252880.1 mRNA upstream 94635 17634806 ~ 17640897 (-) True LOC122354622
XM_043252881.1 mRNA upstream 95139 17635310 ~ 17640897 (-) False LOC122354622
XM_043252879.1 mRNA upstream 95194 17635365 ~ 17640897 (-) False LOC122354622
XM_043252830.1 mRNA upstream 141889 17682060 ~ 17692681 (-) True LOC122354584
TU121711 other downstream 2135812 15400918 ~ 15401691 (-) True LOC122354564
TU121487 other downstream 2302447 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 2323445 15204961 ~ 15214058 (-) True G82067
TU121170 other downstream 3001111 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 3085763 14442601 ~ 14451740 (-) True chrna4b
TU122326 other upstream 10410 17550581 ~ 17559836 (-) True G82588
TU122328 other upstream 33431 17573602 ~ 17576984 (-) True G82590
XR_006252134.1 other upstream 94635 17634806 ~ 17635665 (-) False LOC122354622
XR_006252133.1 other upstream 95194 17635365 ~ 17635664 (-) False LOC122354622
TU122389 other upstream 174688 17714859 ~ 17716567 (-) False LOC122354587

Expression Profile